Gene : Eucgr.C01437 E. grandis v2.0
Defline:  (1 of 22) PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Genomic Order:  1122
Name:  ? Eucgr.C01437 Secondary Identifier:  ? PAC:32039175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01437 0.5kb upstream 0.5kb upstream 10823 true Chr03: 22524097-22534919 Eucalyptus grandis
Eucgr.C01437 0.5kb upstream 0.5kb upstream 500 false Chr03: 22534420-22534919 Eucalyptus grandis
Eucgr.C01437 0.5kb downstream 0.5kb downstream 10823 true Chr03: 22523597-22534419 Eucalyptus grandis
Eucgr.C01437 0.5kb downstream 0.5kb downstream 500 false Chr03: 22523597-22524096 Eucalyptus grandis
Eucgr.C01437 1.0kb upstream 1.0kb upstream 11323 true Chr03: 22524097-22535419 Eucalyptus grandis
Eucgr.C01437 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22534420-22535419 Eucalyptus grandis
Eucgr.C01437 1.0kb downstream 1.0kb downstream 11323 true Chr03: 22523097-22534419 Eucalyptus grandis
Eucgr.C01437 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22523097-22524096 Eucalyptus grandis
Eucgr.C01437 2.0kb upstream 2.0kb upstream 12323 true Chr03: 22524097-22536419 Eucalyptus grandis
Eucgr.C01437 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22534420-22536419 Eucalyptus grandis
Eucgr.C01437 2.0kb downstream 2.0kb downstream 12323 true Chr03: 22522097-22534419 Eucalyptus grandis
Eucgr.C01437 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22522097-22524096 Eucalyptus grandis
Eucgr.C01437 5.0kb upstream 5.0kb upstream 15323 true Chr03: 22524097-22539419 Eucalyptus grandis
Eucgr.C01437 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22534420-22539419 Eucalyptus grandis
Eucgr.C01437 5.0kb downstream 5.0kb downstream 15323 true Chr03: 22519097-22534419 Eucalyptus grandis
Eucgr.C01437 5.0kb downstream 5.0kb downstream 5000 false Chr03: 22519097-22524096 Eucalyptus grandis
Eucgr.C01437 10.0kb upstream 10.0kb upstream 20323 true Chr03: 22524097-22544419 Eucalyptus grandis
Eucgr.C01437 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22534420-22544419 Eucalyptus grandis
Eucgr.C01437 10.0kb downstream 10.0kb downstream 20323 true Chr03: 22514097-22534419 Eucalyptus grandis
Eucgr.C01437 10.0kb downstream 10.0kb downstream 10000 false Chr03: 22514097-22524096 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784042 5273 Angiosperm View MSA
124052328 5270 Rosid View MSA
123755880 5271 Pentapetalae View MSA
122777090 5272 Eudicot View MSA
121055477 5274 Embryophyte View MSA
123095408 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3053 0.0 25.2751    
cufflinks 13.184 0.0 29.269    
cufflinks 12.9001 0.0 28.6724    
cufflinks 14.3481 0.0 31.792   High
cufflinks 10.7268 0.0 23.9783    
cufflinks 9.06416 0.0 20.5539   Low

0 Strain