Gene : Eucgr.C01428 E. grandis v2.0
Defline:  (1 of 12) PTHR24007:SF8 - BRIZ1 Genomic Order:  1130
Name:  ? Eucgr.C01428 Secondary Identifier:  ? PAC:32036350
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01428 0.5kb upstream 0.5kb upstream 4431 true Chr03: 22676459-22680889 Eucalyptus grandis
Eucgr.C01428 0.5kb upstream 0.5kb upstream 500 false Chr03: 22676459-22676958 Eucalyptus grandis
Eucgr.C01428 0.5kb downstream 0.5kb downstream 4431 true Chr03: 22676959-22681389 Eucalyptus grandis
Eucgr.C01428 0.5kb downstream 0.5kb downstream 500 false Chr03: 22680890-22681389 Eucalyptus grandis
Eucgr.C01428 1.0kb upstream 1.0kb upstream 4931 true Chr03: 22675959-22680889 Eucalyptus grandis
Eucgr.C01428 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22675959-22676958 Eucalyptus grandis
Eucgr.C01428 1.0kb downstream 1.0kb downstream 4931 true Chr03: 22676959-22681889 Eucalyptus grandis
Eucgr.C01428 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22680890-22681889 Eucalyptus grandis
Eucgr.C01428 2.0kb upstream 2.0kb upstream 5931 true Chr03: 22674959-22680889 Eucalyptus grandis
Eucgr.C01428 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22674959-22676958 Eucalyptus grandis
Eucgr.C01428 2.0kb downstream 2.0kb downstream 5931 true Chr03: 22676959-22682889 Eucalyptus grandis
Eucgr.C01428 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22680890-22682889 Eucalyptus grandis
Eucgr.C01428 5.0kb upstream 5.0kb upstream 8931 true Chr03: 22671959-22680889 Eucalyptus grandis
Eucgr.C01428 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22671959-22676958 Eucalyptus grandis
Eucgr.C01428 5.0kb downstream 5.0kb downstream 8931 true Chr03: 22676959-22685889 Eucalyptus grandis
Eucgr.C01428 5.0kb downstream 5.0kb downstream 5000 false Chr03: 22680890-22685889 Eucalyptus grandis
Eucgr.C01428 10.0kb upstream 10.0kb upstream 13931 true Chr03: 22666959-22680889 Eucalyptus grandis
Eucgr.C01428 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22666959-22676958 Eucalyptus grandis
Eucgr.C01428 10.0kb downstream 10.0kb downstream 13931 true Chr03: 22676959-22690889 Eucalyptus grandis
Eucgr.C01428 10.0kb downstream 10.0kb downstream 10000 false Chr03: 22680890-22690889 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062945 5270 Rosid View MSA
123739416 5271 Pentapetalae View MSA
122796180 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95203 0.0 7.91751    
cufflinks 3.21904 0.0 8.46854    
cufflinks 1.6786 0.0 4.74294   Low
cufflinks 1.92568 0.0 5.33039    
cufflinks 2.3595 0.0 6.42681    
cufflinks 5.99423 0.0 15.1055   High

0 Strain