Gene : Eucgr.C01384 E. grandis v2.0
Defline:  (1 of 1) PTHR15131 - SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 Genomic Order:  1190
Name:  ? Eucgr.C01384 Secondary Identifier:  ? PAC:32036251
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01384 0.5kb upstream 0.5kb upstream 6502 true Chr03: 24137211-24143712 Eucalyptus grandis
Eucgr.C01384 0.5kb upstream 0.5kb upstream 500 false Chr03: 24137211-24137710 Eucalyptus grandis
Eucgr.C01384 0.5kb downstream 0.5kb downstream 6502 true Chr03: 24137711-24144212 Eucalyptus grandis
Eucgr.C01384 0.5kb downstream 0.5kb downstream 500 false Chr03: 24143713-24144212 Eucalyptus grandis
Eucgr.C01384 1.0kb upstream 1.0kb upstream 7002 true Chr03: 24136711-24143712 Eucalyptus grandis
Eucgr.C01384 1.0kb upstream 1.0kb upstream 1000 false Chr03: 24136711-24137710 Eucalyptus grandis
Eucgr.C01384 1.0kb downstream 1.0kb downstream 7002 true Chr03: 24137711-24144712 Eucalyptus grandis
Eucgr.C01384 1.0kb downstream 1.0kb downstream 1000 false Chr03: 24143713-24144712 Eucalyptus grandis
Eucgr.C01384 2.0kb upstream 2.0kb upstream 8002 true Chr03: 24135711-24143712 Eucalyptus grandis
Eucgr.C01384 2.0kb upstream 2.0kb upstream 2000 false Chr03: 24135711-24137710 Eucalyptus grandis
Eucgr.C01384 2.0kb downstream 2.0kb downstream 8002 true Chr03: 24137711-24145712 Eucalyptus grandis
Eucgr.C01384 2.0kb downstream 2.0kb downstream 2000 false Chr03: 24143713-24145712 Eucalyptus grandis
Eucgr.C01384 5.0kb upstream 5.0kb upstream 11002 true Chr03: 24132711-24143712 Eucalyptus grandis
Eucgr.C01384 5.0kb upstream 5.0kb upstream 5000 false Chr03: 24132711-24137710 Eucalyptus grandis
Eucgr.C01384 5.0kb downstream 5.0kb downstream 11002 true Chr03: 24137711-24148712 Eucalyptus grandis
Eucgr.C01384 5.0kb downstream 5.0kb downstream 5000 false Chr03: 24143713-24148712 Eucalyptus grandis
Eucgr.C01384 10.0kb upstream 10.0kb upstream 16002 true Chr03: 24127711-24143712 Eucalyptus grandis
Eucgr.C01384 10.0kb upstream 10.0kb upstream 10000 false Chr03: 24127711-24137710 Eucalyptus grandis
Eucgr.C01384 10.0kb downstream 10.0kb downstream 16002 true Chr03: 24137711-24153712 Eucalyptus grandis
Eucgr.C01384 10.0kb downstream 10.0kb downstream 10000 false Chr03: 24143713-24153712 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060521 5270 Rosid View MSA
123737660 5271 Pentapetalae View MSA
122797190 5272 Eudicot View MSA
122043179 5273 Angiosperm View MSA
121344742 5274 Embryophyte View MSA
123426038 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16391 0.0 3.72529    
cufflinks 1.65528 0.0 4.82987    
cufflinks 1.72006 0.0 4.97596    
cufflinks 0.771421 0.0 2.61272   Low
cufflinks 0.892646 0.0 3.06281    
cufflinks 2.75922 0.0 7.76081   High

0 Strain