Gene : Eucgr.C01369 E. grandis v2.0
Defline:  (1 of 6) 2.4.1.144 - Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase / acetylglucosaminyltransferase III Genomic Order:  1178
Name:  ? Eucgr.C01369 Secondary Identifier:  ? PAC:32036823
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7426 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01369 0.5kb upstream 0.5kb upstream 1580 true Chr03: 23953729-23955308 Eucalyptus grandis
Eucgr.C01369 0.5kb upstream 0.5kb upstream 500 false Chr03: 23954809-23955308 Eucalyptus grandis
Eucgr.C01369 0.5kb downstream 0.5kb downstream 1580 true Chr03: 23953229-23954808 Eucalyptus grandis
Eucgr.C01369 0.5kb downstream 0.5kb downstream 500 false Chr03: 23953229-23953728 Eucalyptus grandis
Eucgr.C01369 1.0kb upstream 1.0kb upstream 2080 true Chr03: 23953729-23955808 Eucalyptus grandis
Eucgr.C01369 1.0kb upstream 1.0kb upstream 1000 false Chr03: 23954809-23955808 Eucalyptus grandis
Eucgr.C01369 1.0kb downstream 1.0kb downstream 2080 true Chr03: 23952729-23954808 Eucalyptus grandis
Eucgr.C01369 1.0kb downstream 1.0kb downstream 1000 false Chr03: 23952729-23953728 Eucalyptus grandis
Eucgr.C01369 2.0kb upstream 2.0kb upstream 3080 true Chr03: 23953729-23956808 Eucalyptus grandis
Eucgr.C01369 2.0kb upstream 2.0kb upstream 2000 false Chr03: 23954809-23956808 Eucalyptus grandis
Eucgr.C01369 2.0kb downstream 2.0kb downstream 3080 true Chr03: 23951729-23954808 Eucalyptus grandis
Eucgr.C01369 2.0kb downstream 2.0kb downstream 2000 false Chr03: 23951729-23953728 Eucalyptus grandis
Eucgr.C01369 5.0kb upstream 5.0kb upstream 6080 true Chr03: 23953729-23959808 Eucalyptus grandis
Eucgr.C01369 5.0kb upstream 5.0kb upstream 5000 false Chr03: 23954809-23959808 Eucalyptus grandis
Eucgr.C01369 5.0kb downstream 5.0kb downstream 6080 true Chr03: 23948729-23954808 Eucalyptus grandis
Eucgr.C01369 5.0kb downstream 5.0kb downstream 5000 false Chr03: 23948729-23953728 Eucalyptus grandis
Eucgr.C01369 10.0kb upstream 10.0kb upstream 11080 true Chr03: 23953729-23964808 Eucalyptus grandis
Eucgr.C01369 10.0kb upstream 10.0kb upstream 10000 false Chr03: 23954809-23964808 Eucalyptus grandis
Eucgr.C01369 10.0kb downstream 10.0kb downstream 11080 true Chr03: 23943729-23954808 Eucalyptus grandis
Eucgr.C01369 10.0kb downstream 10.0kb downstream 10000 false Chr03: 23943729-23953728 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067293 5270 Rosid View MSA
123743296 5271 Pentapetalae View MSA
122789853 5272 Eudicot View MSA
122046234 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9913 0.0 54.6446    
cufflinks 15.4387 0.0 36.0994   Low
cufflinks 16.998 0.0 39.7175    
cufflinks 20.3078 0.0 46.6192    
cufflinks 24.3701 0.0 55.3053   High
cufflinks 21.4981 0.0 49.539    

0 Strain