Gene : Eucgr.C01400 E. grandis v2.0
Defline:  (1 of 12) PTHR24007:SF8 - BRIZ1 Genomic Order:  1152
Name:  ? Eucgr.C01400 Secondary Identifier:  ? PAC:32038661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01400 0.5kb upstream 0.5kb upstream 6653 true Chr03: 23173952-23180604 Eucalyptus grandis
Eucgr.C01400 0.5kb upstream 0.5kb upstream 500 false Chr03: 23173952-23174451 Eucalyptus grandis
Eucgr.C01400 0.5kb downstream 0.5kb downstream 6653 true Chr03: 23174452-23181104 Eucalyptus grandis
Eucgr.C01400 0.5kb downstream 0.5kb downstream 500 false Chr03: 23180605-23181104 Eucalyptus grandis
Eucgr.C01400 1.0kb upstream 1.0kb upstream 7153 true Chr03: 23173452-23180604 Eucalyptus grandis
Eucgr.C01400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 23173452-23174451 Eucalyptus grandis
Eucgr.C01400 1.0kb downstream 1.0kb downstream 7153 true Chr03: 23174452-23181604 Eucalyptus grandis
Eucgr.C01400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 23180605-23181604 Eucalyptus grandis
Eucgr.C01400 2.0kb upstream 2.0kb upstream 8153 true Chr03: 23172452-23180604 Eucalyptus grandis
Eucgr.C01400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 23172452-23174451 Eucalyptus grandis
Eucgr.C01400 2.0kb downstream 2.0kb downstream 8153 true Chr03: 23174452-23182604 Eucalyptus grandis
Eucgr.C01400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 23180605-23182604 Eucalyptus grandis
Eucgr.C01400 5.0kb upstream 5.0kb upstream 11153 true Chr03: 23169452-23180604 Eucalyptus grandis
Eucgr.C01400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 23169452-23174451 Eucalyptus grandis
Eucgr.C01400 5.0kb downstream 5.0kb downstream 11153 true Chr03: 23174452-23185604 Eucalyptus grandis
Eucgr.C01400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 23180605-23185604 Eucalyptus grandis
Eucgr.C01400 10.0kb upstream 10.0kb upstream 16153 true Chr03: 23164452-23180604 Eucalyptus grandis
Eucgr.C01400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 23164452-23174451 Eucalyptus grandis
Eucgr.C01400 10.0kb downstream 10.0kb downstream 16153 true Chr03: 23174452-23190604 Eucalyptus grandis
Eucgr.C01400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 23180605-23190604 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062945 5270 Rosid View MSA
123739416 5271 Pentapetalae View MSA
122796180 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.403911 0.0 1.30292 Low Low
cufflinks 1.30679 0.0 3.64648    
cufflinks 0.652709 0.0 1.97171    
cufflinks 0.635189 0.0 1.91576    
cufflinks 3.34077 0.0 8.5254   High
cufflinks 0.928378 0.0 2.72946    

0 Strain