Gene : Eucgr.C01353 E. grandis v2.0
Defline:  (1 of 12) PTHR24007:SF8 - BRIZ1 Genomic Order:  1165
Name:  ? Eucgr.C01353 Secondary Identifier:  ? PAC:32036152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01353 0.5kb upstream 0.5kb upstream 3442 true Chr03: 23638818-23642259 Eucalyptus grandis
Eucgr.C01353 0.5kb upstream 0.5kb upstream 500 false Chr03: 23638818-23639317 Eucalyptus grandis
Eucgr.C01353 0.5kb downstream 0.5kb downstream 3442 true Chr03: 23639318-23642759 Eucalyptus grandis
Eucgr.C01353 0.5kb downstream 0.5kb downstream 500 false Chr03: 23642260-23642759 Eucalyptus grandis
Eucgr.C01353 1.0kb upstream 1.0kb upstream 3942 true Chr03: 23638318-23642259 Eucalyptus grandis
Eucgr.C01353 1.0kb upstream 1.0kb upstream 1000 false Chr03: 23638318-23639317 Eucalyptus grandis
Eucgr.C01353 1.0kb downstream 1.0kb downstream 3942 true Chr03: 23639318-23643259 Eucalyptus grandis
Eucgr.C01353 1.0kb downstream 1.0kb downstream 1000 false Chr03: 23642260-23643259 Eucalyptus grandis
Eucgr.C01353 2.0kb upstream 2.0kb upstream 4942 true Chr03: 23637318-23642259 Eucalyptus grandis
Eucgr.C01353 2.0kb upstream 2.0kb upstream 2000 false Chr03: 23637318-23639317 Eucalyptus grandis
Eucgr.C01353 2.0kb downstream 2.0kb downstream 4942 true Chr03: 23639318-23644259 Eucalyptus grandis
Eucgr.C01353 2.0kb downstream 2.0kb downstream 2000 false Chr03: 23642260-23644259 Eucalyptus grandis
Eucgr.C01353 5.0kb upstream 5.0kb upstream 7942 true Chr03: 23634318-23642259 Eucalyptus grandis
Eucgr.C01353 5.0kb upstream 5.0kb upstream 5000 false Chr03: 23634318-23639317 Eucalyptus grandis
Eucgr.C01353 5.0kb downstream 5.0kb downstream 7942 true Chr03: 23639318-23647259 Eucalyptus grandis
Eucgr.C01353 5.0kb downstream 5.0kb downstream 5000 false Chr03: 23642260-23647259 Eucalyptus grandis
Eucgr.C01353 10.0kb upstream 10.0kb upstream 12942 true Chr03: 23629318-23642259 Eucalyptus grandis
Eucgr.C01353 10.0kb upstream 10.0kb upstream 10000 false Chr03: 23629318-23639317 Eucalyptus grandis
Eucgr.C01353 10.0kb downstream 10.0kb downstream 12942 true Chr03: 23639318-23652259 Eucalyptus grandis
Eucgr.C01353 10.0kb downstream 10.0kb downstream 10000 false Chr03: 23642260-23652259 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062945 5270 Rosid View MSA
123739416 5271 Pentapetalae View MSA
122796180 5272 Eudicot View MSA
122049879 5273 Angiosperm View MSA
121344447 5274 Embryophyte View MSA
123425921 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13723 0.0 6.11171    
cufflinks 1.29609 0.0 3.88183    
cufflinks 2.05853 0.0 5.90467    
cufflinks 1.36597 0.0 4.0797    
cufflinks 1.881 0.0 5.42764    
cufflinks 9.34013 0.0 23.1042   High

0 Strain