Gene : Eucgr.C01265 E. grandis v2.0
Defline:  (1 of 3) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  867
Name:  ? Eucgr.C01265 Secondary Identifier:  ? PAC:32036079
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Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ILEUDEG-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5136 Eucalyptus grandis pathologic  
Egrandis PWY-5137 Eucalyptus grandis pathologic  
Egrandis PWY-5138 Eucalyptus grandis pathologic  
Egrandis PWY-561 Eucalyptus grandis pathologic  
Egrandis PWY-6435 Eucalyptus grandis pathologic  
Egrandis PWY-6837 Eucalyptus grandis pathologic  
Egrandis PWY-7036 Eucalyptus grandis pathologic  
Egrandis PWY-735 Eucalyptus grandis pathologic  
Egrandis PWY-7606 Eucalyptus grandis pathologic  
Egrandis PWY-7726 Eucalyptus grandis pathologic  
Egrandis VALDEG-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01265 0.5kb upstream 0.5kb upstream 11860 true Chr03: 16778066-16789925 Eucalyptus grandis
Eucgr.C01265 0.5kb upstream 0.5kb upstream 500 false Chr03: 16789426-16789925 Eucalyptus grandis
Eucgr.C01265 0.5kb downstream 0.5kb downstream 11860 true Chr03: 16777566-16789425 Eucalyptus grandis
Eucgr.C01265 0.5kb downstream 0.5kb downstream 500 false Chr03: 16777566-16778065 Eucalyptus grandis
Eucgr.C01265 1.0kb upstream 1.0kb upstream 12360 true Chr03: 16778066-16790425 Eucalyptus grandis
Eucgr.C01265 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16789426-16790425 Eucalyptus grandis
Eucgr.C01265 1.0kb downstream 1.0kb downstream 12360 true Chr03: 16777066-16789425 Eucalyptus grandis
Eucgr.C01265 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16777066-16778065 Eucalyptus grandis
Eucgr.C01265 2.0kb upstream 2.0kb upstream 13360 true Chr03: 16778066-16791425 Eucalyptus grandis
Eucgr.C01265 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16789426-16791425 Eucalyptus grandis
Eucgr.C01265 2.0kb downstream 2.0kb downstream 13360 true Chr03: 16776066-16789425 Eucalyptus grandis
Eucgr.C01265 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16776066-16778065 Eucalyptus grandis
Eucgr.C01265 5.0kb upstream 5.0kb upstream 16360 true Chr03: 16778066-16794425 Eucalyptus grandis
Eucgr.C01265 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16789426-16794425 Eucalyptus grandis
Eucgr.C01265 5.0kb downstream 5.0kb downstream 16360 true Chr03: 16773066-16789425 Eucalyptus grandis
Eucgr.C01265 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16773066-16778065 Eucalyptus grandis
Eucgr.C01265 10.0kb upstream 10.0kb upstream 21360 true Chr03: 16778066-16799425 Eucalyptus grandis
Eucgr.C01265 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16789426-16799425 Eucalyptus grandis
Eucgr.C01265 10.0kb downstream 10.0kb downstream 21360 true Chr03: 16768066-16789425 Eucalyptus grandis
Eucgr.C01265 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16768066-16778065 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0544 0.0 46.5701    
cufflinks 9.41468 0.0 21.0874   Low
cufflinks 24.6891 0.0 54.7367   High
cufflinks 10.2111 0.0 22.7905    
cufflinks 12.2639 0.0 27.2594    
cufflinks 17.518 0.0 38.7712    

0 Strain