Gene : Eucgr.C01260 E. grandis v2.0
Defline:  (1 of 1) PTHR13547:SF1 - MITOCHONDRIAL RIBONUCLEASE P PROTEIN 3 Genomic Order:  871
Name:  ? Eucgr.C01260 Secondary Identifier:  ? PAC:32036621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01260 0.5kb upstream 0.5kb upstream 4849 true Chr03: 16825157-16830005 Eucalyptus grandis
Eucgr.C01260 0.5kb upstream 0.5kb upstream 500 false Chr03: 16825157-16825656 Eucalyptus grandis
Eucgr.C01260 0.5kb downstream 0.5kb downstream 4849 true Chr03: 16825657-16830505 Eucalyptus grandis
Eucgr.C01260 0.5kb downstream 0.5kb downstream 500 false Chr03: 16830006-16830505 Eucalyptus grandis
Eucgr.C01260 1.0kb upstream 1.0kb upstream 5349 true Chr03: 16824657-16830005 Eucalyptus grandis
Eucgr.C01260 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16824657-16825656 Eucalyptus grandis
Eucgr.C01260 1.0kb downstream 1.0kb downstream 5349 true Chr03: 16825657-16831005 Eucalyptus grandis
Eucgr.C01260 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16830006-16831005 Eucalyptus grandis
Eucgr.C01260 2.0kb upstream 2.0kb upstream 6349 true Chr03: 16823657-16830005 Eucalyptus grandis
Eucgr.C01260 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16823657-16825656 Eucalyptus grandis
Eucgr.C01260 2.0kb downstream 2.0kb downstream 6349 true Chr03: 16825657-16832005 Eucalyptus grandis
Eucgr.C01260 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16830006-16832005 Eucalyptus grandis
Eucgr.C01260 5.0kb upstream 5.0kb upstream 9349 true Chr03: 16820657-16830005 Eucalyptus grandis
Eucgr.C01260 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16820657-16825656 Eucalyptus grandis
Eucgr.C01260 5.0kb downstream 5.0kb downstream 9349 true Chr03: 16825657-16835005 Eucalyptus grandis
Eucgr.C01260 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16830006-16835005 Eucalyptus grandis
Eucgr.C01260 10.0kb upstream 10.0kb upstream 14349 true Chr03: 16815657-16830005 Eucalyptus grandis
Eucgr.C01260 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16815657-16825656 Eucalyptus grandis
Eucgr.C01260 10.0kb downstream 10.0kb downstream 14349 true Chr03: 16825657-16840005 Eucalyptus grandis
Eucgr.C01260 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16830006-16840005 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069994 5270 Rosid View MSA
123742541 5271 Pentapetalae View MSA
122794847 5272 Eudicot View MSA
122048517 5273 Angiosperm View MSA
121348403 5274 Embryophyte View MSA
123426144 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06633 0.0 7.72981    
cufflinks 0.464319 0.0 1.5728 Low  
cufflinks 1.51703 0.0 4.21013    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.491978 0.0 1.64356 Low  
cufflinks 7.30686 0.0 17.8471   High

0 Strain