Gene : Eucgr.C01237 E. grandis v2.0
Defline:  (1 of 79) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  1970
Name:  ? Eucgr.C01237 Secondary Identifier:  ? PAC:32036941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01237 0.5kb upstream 0.5kb upstream 5078 true Chr03: 48562046-48567123 Eucalyptus grandis
Eucgr.C01237 0.5kb upstream 0.5kb upstream 500 false Chr03: 48566624-48567123 Eucalyptus grandis
Eucgr.C01237 0.5kb downstream 0.5kb downstream 5078 true Chr03: 48561546-48566623 Eucalyptus grandis
Eucgr.C01237 0.5kb downstream 0.5kb downstream 500 false Chr03: 48561546-48562045 Eucalyptus grandis
Eucgr.C01237 1.0kb upstream 1.0kb upstream 5578 true Chr03: 48562046-48567623 Eucalyptus grandis
Eucgr.C01237 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48566624-48567623 Eucalyptus grandis
Eucgr.C01237 1.0kb downstream 1.0kb downstream 5578 true Chr03: 48561046-48566623 Eucalyptus grandis
Eucgr.C01237 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48561046-48562045 Eucalyptus grandis
Eucgr.C01237 2.0kb upstream 2.0kb upstream 6578 true Chr03: 48562046-48568623 Eucalyptus grandis
Eucgr.C01237 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48566624-48568623 Eucalyptus grandis
Eucgr.C01237 2.0kb downstream 2.0kb downstream 6578 true Chr03: 48560046-48566623 Eucalyptus grandis
Eucgr.C01237 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48560046-48562045 Eucalyptus grandis
Eucgr.C01237 5.0kb upstream 5.0kb upstream 9578 true Chr03: 48562046-48571623 Eucalyptus grandis
Eucgr.C01237 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48566624-48571623 Eucalyptus grandis
Eucgr.C01237 5.0kb downstream 5.0kb downstream 9578 true Chr03: 48557046-48566623 Eucalyptus grandis
Eucgr.C01237 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48557046-48562045 Eucalyptus grandis
Eucgr.C01237 10.0kb upstream 10.0kb upstream 14578 true Chr03: 48562046-48576623 Eucalyptus grandis
Eucgr.C01237 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48566624-48576623 Eucalyptus grandis
Eucgr.C01237 10.0kb downstream 10.0kb downstream 14578 true Chr03: 48552046-48566623 Eucalyptus grandis
Eucgr.C01237 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48552046-48562045 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.2855 0.0 3.45487    
cufflinks 4.44965 0.0 10.5653    
cufflinks 2.46838 0.0 6.20012    
cufflinks 4.08423 0.0 9.77585    
cufflinks 0.762855 0.0 2.15421   Low
cufflinks 6.61262 0.0 15.1719   High

0 Strain