Gene : Eucgr.C01157 E. grandis v2.0
Defline:  (1 of 2) PF09320 - Domain of unknown function (DUF1977) (DUF1977) Genomic Order:  976
Name:  ? Eucgr.C01157 Secondary Identifier:  ? PAC:32039818
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01157 0.5kb upstream 0.5kb upstream 3228 true Chr03: 18475917-18479144 Eucalyptus grandis
Eucgr.C01157 0.5kb upstream 0.5kb upstream 500 false Chr03: 18475917-18476416 Eucalyptus grandis
Eucgr.C01157 0.5kb downstream 0.5kb downstream 3228 true Chr03: 18476417-18479644 Eucalyptus grandis
Eucgr.C01157 0.5kb downstream 0.5kb downstream 500 false Chr03: 18479145-18479644 Eucalyptus grandis
Eucgr.C01157 1.0kb upstream 1.0kb upstream 3728 true Chr03: 18475417-18479144 Eucalyptus grandis
Eucgr.C01157 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18475417-18476416 Eucalyptus grandis
Eucgr.C01157 1.0kb downstream 1.0kb downstream 3728 true Chr03: 18476417-18480144 Eucalyptus grandis
Eucgr.C01157 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18479145-18480144 Eucalyptus grandis
Eucgr.C01157 2.0kb upstream 2.0kb upstream 4728 true Chr03: 18474417-18479144 Eucalyptus grandis
Eucgr.C01157 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18474417-18476416 Eucalyptus grandis
Eucgr.C01157 2.0kb downstream 2.0kb downstream 4728 true Chr03: 18476417-18481144 Eucalyptus grandis
Eucgr.C01157 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18479145-18481144 Eucalyptus grandis
Eucgr.C01157 5.0kb upstream 5.0kb upstream 7728 true Chr03: 18471417-18479144 Eucalyptus grandis
Eucgr.C01157 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18471417-18476416 Eucalyptus grandis
Eucgr.C01157 5.0kb downstream 5.0kb downstream 7728 true Chr03: 18476417-18484144 Eucalyptus grandis
Eucgr.C01157 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18479145-18484144 Eucalyptus grandis
Eucgr.C01157 10.0kb upstream 10.0kb upstream 12728 true Chr03: 18466417-18479144 Eucalyptus grandis
Eucgr.C01157 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18466417-18476416 Eucalyptus grandis
Eucgr.C01157 10.0kb downstream 10.0kb downstream 12728 true Chr03: 18476417-18489144 Eucalyptus grandis
Eucgr.C01157 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18479145-18489144 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061227 5270 Rosid View MSA
123743637 5271 Pentapetalae View MSA
122792301 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9925 0.0 84.3497 High  
cufflinks 43.4867 0.0 96.904 High  
cufflinks 34.3755 0.0 76.1531 High  
cufflinks 48.3876 0.0 108.223 High  
cufflinks 25.0103 0.0 55.3226   Low
cufflinks 47.1022 0.0 105.396 High  

0 Strain