Gene : Eucgr.C01111 E. grandis v2.0
Defline:  (1 of 10) KOG0096 - GTPase Ran/TC4/GSP1 (nuclear protein transport pathway), small G protein superfamily Genomic Order:  944
Name:  ? Eucgr.C01111 Secondary Identifier:  ? PAC:32039184
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01111 0.5kb upstream 0.5kb upstream 3651 true Chr03: 17912281-17915931 Eucalyptus grandis
Eucgr.C01111 0.5kb upstream 0.5kb upstream 500 false Chr03: 17912281-17912780 Eucalyptus grandis
Eucgr.C01111 0.5kb downstream 0.5kb downstream 3651 true Chr03: 17912781-17916431 Eucalyptus grandis
Eucgr.C01111 0.5kb downstream 0.5kb downstream 500 false Chr03: 17915932-17916431 Eucalyptus grandis
Eucgr.C01111 1.0kb upstream 1.0kb upstream 4151 true Chr03: 17911781-17915931 Eucalyptus grandis
Eucgr.C01111 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17911781-17912780 Eucalyptus grandis
Eucgr.C01111 1.0kb downstream 1.0kb downstream 4151 true Chr03: 17912781-17916931 Eucalyptus grandis
Eucgr.C01111 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17915932-17916931 Eucalyptus grandis
Eucgr.C01111 2.0kb upstream 2.0kb upstream 5151 true Chr03: 17910781-17915931 Eucalyptus grandis
Eucgr.C01111 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17910781-17912780 Eucalyptus grandis
Eucgr.C01111 2.0kb downstream 2.0kb downstream 5151 true Chr03: 17912781-17917931 Eucalyptus grandis
Eucgr.C01111 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17915932-17917931 Eucalyptus grandis
Eucgr.C01111 5.0kb upstream 5.0kb upstream 8151 true Chr03: 17907781-17915931 Eucalyptus grandis
Eucgr.C01111 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17907781-17912780 Eucalyptus grandis
Eucgr.C01111 5.0kb downstream 5.0kb downstream 8151 true Chr03: 17912781-17920931 Eucalyptus grandis
Eucgr.C01111 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17915932-17920931 Eucalyptus grandis
Eucgr.C01111 10.0kb upstream 10.0kb upstream 13151 true Chr03: 17902781-17915931 Eucalyptus grandis
Eucgr.C01111 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17902781-17912780 Eucalyptus grandis
Eucgr.C01111 10.0kb downstream 10.0kb downstream 13151 true Chr03: 17912781-17925931 Eucalyptus grandis
Eucgr.C01111 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17915932-17925931 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35364 0.0 3.98889    
cufflinks 0.56564 0.0 1.85921   Low
cufflinks 0.915979 0.0 2.80871    
cufflinks 2.18082 0.0 6.08651   High
cufflinks 2.42653 0.0 6.72843   High
cufflinks 0.579504 0.0 1.91324 Low Low

0 Strain