Gene : Eucgr.C01077 E. grandis v2.0
Defline:  (1 of 1) PTHR23245:SF36 - TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE Genomic Order:  915
Name:  ? Eucgr.C01077 Secondary Identifier:  ? PAC:32039812
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6829 Eucalyptus grandis pathologic  
Egrandis PWY-7283 Eucalyptus grandis pathologic  
Egrandis PWY-7286 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01077 0.5kb upstream 0.5kb upstream 5113 true Chr03: 17428232-17433344 Eucalyptus grandis
Eucgr.C01077 0.5kb upstream 0.5kb upstream 500 false Chr03: 17428232-17428731 Eucalyptus grandis
Eucgr.C01077 0.5kb downstream 0.5kb downstream 5113 true Chr03: 17428732-17433844 Eucalyptus grandis
Eucgr.C01077 0.5kb downstream 0.5kb downstream 500 false Chr03: 17433345-17433844 Eucalyptus grandis
Eucgr.C01077 1.0kb upstream 1.0kb upstream 5613 true Chr03: 17427732-17433344 Eucalyptus grandis
Eucgr.C01077 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17427732-17428731 Eucalyptus grandis
Eucgr.C01077 1.0kb downstream 1.0kb downstream 5613 true Chr03: 17428732-17434344 Eucalyptus grandis
Eucgr.C01077 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17433345-17434344 Eucalyptus grandis
Eucgr.C01077 2.0kb upstream 2.0kb upstream 6613 true Chr03: 17426732-17433344 Eucalyptus grandis
Eucgr.C01077 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17426732-17428731 Eucalyptus grandis
Eucgr.C01077 2.0kb downstream 2.0kb downstream 6613 true Chr03: 17428732-17435344 Eucalyptus grandis
Eucgr.C01077 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17433345-17435344 Eucalyptus grandis
Eucgr.C01077 5.0kb upstream 5.0kb upstream 9613 true Chr03: 17423732-17433344 Eucalyptus grandis
Eucgr.C01077 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17423732-17428731 Eucalyptus grandis
Eucgr.C01077 5.0kb downstream 5.0kb downstream 9613 true Chr03: 17428732-17438344 Eucalyptus grandis
Eucgr.C01077 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17433345-17438344 Eucalyptus grandis
Eucgr.C01077 10.0kb upstream 10.0kb upstream 14613 true Chr03: 17418732-17433344 Eucalyptus grandis
Eucgr.C01077 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17418732-17428731 Eucalyptus grandis
Eucgr.C01077 10.0kb downstream 10.0kb downstream 14613 true Chr03: 17428732-17443344 Eucalyptus grandis
Eucgr.C01077 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17433345-17443344 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073928 5270 Rosid View MSA
123747956 5271 Pentapetalae View MSA
122788813 5272 Eudicot View MSA
122045692 5273 Angiosperm View MSA
121347346 5274 Embryophyte View MSA
123426085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.08963 0.0 14.5154    
cufflinks 4.91405 0.0 11.9125    
cufflinks 4.66209 0.0 13.721    
cufflinks 4.76467 0.0 11.5115    
cufflinks 6.50781 0.0 15.3431    
cufflinks 10.5825 0.0 30.6829   High

0 Strain