Gene : Eucgr.C01055 E. grandis v2.0
Defline:  (1 of 1) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  897
Name:  ? Eucgr.C01055 Secondary Identifier:  ? PAC:32037063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01055 0.5kb upstream 0.5kb upstream 4220 true Chr03: 17136618-17140837 Eucalyptus grandis
Eucgr.C01055 0.5kb upstream 0.5kb upstream 500 false Chr03: 17136618-17137117 Eucalyptus grandis
Eucgr.C01055 0.5kb downstream 0.5kb downstream 4220 true Chr03: 17137118-17141337 Eucalyptus grandis
Eucgr.C01055 0.5kb downstream 0.5kb downstream 500 false Chr03: 17140838-17141337 Eucalyptus grandis
Eucgr.C01055 1.0kb upstream 1.0kb upstream 4720 true Chr03: 17136118-17140837 Eucalyptus grandis
Eucgr.C01055 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17136118-17137117 Eucalyptus grandis
Eucgr.C01055 1.0kb downstream 1.0kb downstream 4720 true Chr03: 17137118-17141837 Eucalyptus grandis
Eucgr.C01055 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17140838-17141837 Eucalyptus grandis
Eucgr.C01055 2.0kb upstream 2.0kb upstream 5720 true Chr03: 17135118-17140837 Eucalyptus grandis
Eucgr.C01055 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17135118-17137117 Eucalyptus grandis
Eucgr.C01055 2.0kb downstream 2.0kb downstream 5720 true Chr03: 17137118-17142837 Eucalyptus grandis
Eucgr.C01055 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17140838-17142837 Eucalyptus grandis
Eucgr.C01055 5.0kb upstream 5.0kb upstream 8720 true Chr03: 17132118-17140837 Eucalyptus grandis
Eucgr.C01055 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17132118-17137117 Eucalyptus grandis
Eucgr.C01055 5.0kb downstream 5.0kb downstream 8720 true Chr03: 17137118-17145837 Eucalyptus grandis
Eucgr.C01055 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17140838-17145837 Eucalyptus grandis
Eucgr.C01055 10.0kb upstream 10.0kb upstream 13720 true Chr03: 17127118-17140837 Eucalyptus grandis
Eucgr.C01055 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17127118-17137117 Eucalyptus grandis
Eucgr.C01055 10.0kb downstream 10.0kb downstream 13720 true Chr03: 17137118-17150837 Eucalyptus grandis
Eucgr.C01055 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17140838-17150837 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070962 5270 Rosid View MSA
123742663 5271 Pentapetalae View MSA
122794855 5272 Eudicot View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.488 0.0 45.3885   High
cufflinks 11.1752 0.0 25.3874    
cufflinks 18.5279 0.0 41.186    
cufflinks 6.6384 0.0 15.7184    
cufflinks 5.57862 0.0 13.3875   Low
cufflinks 12.3982 0.0 27.7813    

0 Strain