Gene : Eucgr.C01012 E. grandis v2.0
Defline:  (1 of 1) PTHR11062:SF84 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  836
Name:  ? Eucgr.C01012 Secondary Identifier:  ? PAC:32040129
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5980 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01012 0.5kb upstream 0.5kb upstream 5401 true Chr03: 16227691-16233091 Eucalyptus grandis
Eucgr.C01012 0.5kb upstream 0.5kb upstream 500 false Chr03: 16232592-16233091 Eucalyptus grandis
Eucgr.C01012 0.5kb downstream 0.5kb downstream 5401 true Chr03: 16227191-16232591 Eucalyptus grandis
Eucgr.C01012 0.5kb downstream 0.5kb downstream 500 false Chr03: 16227191-16227690 Eucalyptus grandis
Eucgr.C01012 1.0kb upstream 1.0kb upstream 5901 true Chr03: 16227691-16233591 Eucalyptus grandis
Eucgr.C01012 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16232592-16233591 Eucalyptus grandis
Eucgr.C01012 1.0kb downstream 1.0kb downstream 5901 true Chr03: 16226691-16232591 Eucalyptus grandis
Eucgr.C01012 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16226691-16227690 Eucalyptus grandis
Eucgr.C01012 2.0kb upstream 2.0kb upstream 6901 true Chr03: 16227691-16234591 Eucalyptus grandis
Eucgr.C01012 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16232592-16234591 Eucalyptus grandis
Eucgr.C01012 2.0kb downstream 2.0kb downstream 6901 true Chr03: 16225691-16232591 Eucalyptus grandis
Eucgr.C01012 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16225691-16227690 Eucalyptus grandis
Eucgr.C01012 5.0kb upstream 5.0kb upstream 9901 true Chr03: 16227691-16237591 Eucalyptus grandis
Eucgr.C01012 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16232592-16237591 Eucalyptus grandis
Eucgr.C01012 5.0kb downstream 5.0kb downstream 9901 true Chr03: 16222691-16232591 Eucalyptus grandis
Eucgr.C01012 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16222691-16227690 Eucalyptus grandis
Eucgr.C01012 10.0kb upstream 10.0kb upstream 14901 true Chr03: 16227691-16242591 Eucalyptus grandis
Eucgr.C01012 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16232592-16242591 Eucalyptus grandis
Eucgr.C01012 10.0kb downstream 10.0kb downstream 14901 true Chr03: 16217691-16232591 Eucalyptus grandis
Eucgr.C01012 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16217691-16227690 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.00073 0.0 9.52675    
cufflinks 2.51644 0.0 6.40108   Low
cufflinks 7.6213 0.0 17.6514   High
cufflinks 3.71928 0.0 10.6019    
cufflinks 5.52361 0.0 15.6709    
cufflinks 7.94434 0.0 18.4083   High

0 Strain