Gene : Eucgr.C01005 E. grandis v2.0
Defline:  (1 of 1) PTHR33265:SF8 - F5F19.20 PROTEIN Genomic Order:  830
Name:  ? Eucgr.C01005 Secondary Identifier:  ? PAC:32037960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01005 0.5kb upstream 0.5kb upstream 1750 true Chr03: 16102279-16104028 Eucalyptus grandis
Eucgr.C01005 0.5kb upstream 0.5kb upstream 500 false Chr03: 16103529-16104028 Eucalyptus grandis
Eucgr.C01005 0.5kb downstream 0.5kb downstream 1750 true Chr03: 16101779-16103528 Eucalyptus grandis
Eucgr.C01005 0.5kb downstream 0.5kb downstream 500 false Chr03: 16101779-16102278 Eucalyptus grandis
Eucgr.C01005 1.0kb upstream 1.0kb upstream 2250 true Chr03: 16102279-16104528 Eucalyptus grandis
Eucgr.C01005 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16103529-16104528 Eucalyptus grandis
Eucgr.C01005 1.0kb downstream 1.0kb downstream 2250 true Chr03: 16101279-16103528 Eucalyptus grandis
Eucgr.C01005 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16101279-16102278 Eucalyptus grandis
Eucgr.C01005 2.0kb upstream 2.0kb upstream 3250 true Chr03: 16102279-16105528 Eucalyptus grandis
Eucgr.C01005 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16103529-16105528 Eucalyptus grandis
Eucgr.C01005 2.0kb downstream 2.0kb downstream 3250 true Chr03: 16100279-16103528 Eucalyptus grandis
Eucgr.C01005 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16100279-16102278 Eucalyptus grandis
Eucgr.C01005 5.0kb upstream 5.0kb upstream 6250 true Chr03: 16102279-16108528 Eucalyptus grandis
Eucgr.C01005 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16103529-16108528 Eucalyptus grandis
Eucgr.C01005 5.0kb downstream 5.0kb downstream 6250 true Chr03: 16097279-16103528 Eucalyptus grandis
Eucgr.C01005 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16097279-16102278 Eucalyptus grandis
Eucgr.C01005 10.0kb upstream 10.0kb upstream 11250 true Chr03: 16102279-16113528 Eucalyptus grandis
Eucgr.C01005 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16103529-16113528 Eucalyptus grandis
Eucgr.C01005 10.0kb downstream 10.0kb downstream 11250 true Chr03: 16092279-16103528 Eucalyptus grandis
Eucgr.C01005 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16092279-16102278 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85604 0.0 7.80629    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.52821 0.0 7.07475    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.490318 0.0 1.6599 Low Low
cufflinks 10.2698 0.0 24.4521   High

0 Strain