Gene : Eucgr.C01013 E. grandis v2.0
Defline:  (1 of 1) PTHR11062:SF77 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  837
Name:  ? Eucgr.C01013 Secondary Identifier:  ? PAC:32036696
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5980 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01013 0.5kb upstream 0.5kb upstream 4180 true Chr03: 16233471-16237650 Eucalyptus grandis
Eucgr.C01013 0.5kb upstream 0.5kb upstream 500 false Chr03: 16237151-16237650 Eucalyptus grandis
Eucgr.C01013 0.5kb downstream 0.5kb downstream 4180 true Chr03: 16232971-16237150 Eucalyptus grandis
Eucgr.C01013 0.5kb downstream 0.5kb downstream 500 false Chr03: 16232971-16233470 Eucalyptus grandis
Eucgr.C01013 1.0kb upstream 1.0kb upstream 4680 true Chr03: 16233471-16238150 Eucalyptus grandis
Eucgr.C01013 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16237151-16238150 Eucalyptus grandis
Eucgr.C01013 1.0kb downstream 1.0kb downstream 4680 true Chr03: 16232471-16237150 Eucalyptus grandis
Eucgr.C01013 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16232471-16233470 Eucalyptus grandis
Eucgr.C01013 2.0kb upstream 2.0kb upstream 5680 true Chr03: 16233471-16239150 Eucalyptus grandis
Eucgr.C01013 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16237151-16239150 Eucalyptus grandis
Eucgr.C01013 2.0kb downstream 2.0kb downstream 5680 true Chr03: 16231471-16237150 Eucalyptus grandis
Eucgr.C01013 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16231471-16233470 Eucalyptus grandis
Eucgr.C01013 5.0kb upstream 5.0kb upstream 8680 true Chr03: 16233471-16242150 Eucalyptus grandis
Eucgr.C01013 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16237151-16242150 Eucalyptus grandis
Eucgr.C01013 5.0kb downstream 5.0kb downstream 8680 true Chr03: 16228471-16237150 Eucalyptus grandis
Eucgr.C01013 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16228471-16233470 Eucalyptus grandis
Eucgr.C01013 10.0kb upstream 10.0kb upstream 13680 true Chr03: 16233471-16247150 Eucalyptus grandis
Eucgr.C01013 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16237151-16247150 Eucalyptus grandis
Eucgr.C01013 10.0kb downstream 10.0kb downstream 13680 true Chr03: 16223471-16237150 Eucalyptus grandis
Eucgr.C01013 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16223471-16233470 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
124069541 5270 Rosid View MSA
123742009 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.969811 0.0 2.65074   High
cufflinks 0.425471 0.0 1.25908 Low  
cufflinks 0.453549 0.0 1.3359    
cufflinks 0.319965 0.0 0.975702 Low  
cufflinks 0.291561 0.0 0.901815 Low Low
cufflinks 0.967735 0.0 2.65904   High

0 Strain