Gene : Eucgr.C01015 E. grandis v2.0
Defline:  (1 of 4) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  839
Name:  ? Eucgr.C01015 Secondary Identifier:  ? PAC:32036294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01015 0.5kb upstream 0.5kb upstream 1304 true Chr03: 16249859-16251162 Eucalyptus grandis
Eucgr.C01015 0.5kb upstream 0.5kb upstream 500 false Chr03: 16249859-16250358 Eucalyptus grandis
Eucgr.C01015 0.5kb downstream 0.5kb downstream 1304 true Chr03: 16250359-16251662 Eucalyptus grandis
Eucgr.C01015 0.5kb downstream 0.5kb downstream 500 false Chr03: 16251163-16251662 Eucalyptus grandis
Eucgr.C01015 1.0kb upstream 1.0kb upstream 1804 true Chr03: 16249359-16251162 Eucalyptus grandis
Eucgr.C01015 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16249359-16250358 Eucalyptus grandis
Eucgr.C01015 1.0kb downstream 1.0kb downstream 1804 true Chr03: 16250359-16252162 Eucalyptus grandis
Eucgr.C01015 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16251163-16252162 Eucalyptus grandis
Eucgr.C01015 2.0kb upstream 2.0kb upstream 2804 true Chr03: 16248359-16251162 Eucalyptus grandis
Eucgr.C01015 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16248359-16250358 Eucalyptus grandis
Eucgr.C01015 2.0kb downstream 2.0kb downstream 2804 true Chr03: 16250359-16253162 Eucalyptus grandis
Eucgr.C01015 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16251163-16253162 Eucalyptus grandis
Eucgr.C01015 5.0kb upstream 5.0kb upstream 5804 true Chr03: 16245359-16251162 Eucalyptus grandis
Eucgr.C01015 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16245359-16250358 Eucalyptus grandis
Eucgr.C01015 5.0kb downstream 5.0kb downstream 5804 true Chr03: 16250359-16256162 Eucalyptus grandis
Eucgr.C01015 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16251163-16256162 Eucalyptus grandis
Eucgr.C01015 10.0kb upstream 10.0kb upstream 10804 true Chr03: 16240359-16251162 Eucalyptus grandis
Eucgr.C01015 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16240359-16250358 Eucalyptus grandis
Eucgr.C01015 10.0kb downstream 10.0kb downstream 10804 true Chr03: 16250359-16261162 Eucalyptus grandis
Eucgr.C01015 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16251163-16261162 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.99222 0.0 8.49158    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.00622 0.0 8.54825    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.11449 0.0 6.25167   Low

0 Strain