Gene : Eucgr.C02022 E. grandis v2.0
Defline:  (1 of 2) 4.1.1.19 - Arginine decarboxylase / L-arginine carboxy-lyase Genomic Order:  1606
Name:  ? Eucgr.C02022 Secondary Identifier:  ? PAC:32036498
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-43 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02022 0.5kb upstream 0.5kb upstream 3042 true Chr03: 37188249-37191290 Eucalyptus grandis
Eucgr.C02022 0.5kb upstream 0.5kb upstream 500 false Chr03: 37190791-37191290 Eucalyptus grandis
Eucgr.C02022 0.5kb downstream 0.5kb downstream 3042 true Chr03: 37187749-37190790 Eucalyptus grandis
Eucgr.C02022 0.5kb downstream 0.5kb downstream 500 false Chr03: 37187749-37188248 Eucalyptus grandis
Eucgr.C02022 1.0kb upstream 1.0kb upstream 3542 true Chr03: 37188249-37191790 Eucalyptus grandis
Eucgr.C02022 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37190791-37191790 Eucalyptus grandis
Eucgr.C02022 1.0kb downstream 1.0kb downstream 3542 true Chr03: 37187249-37190790 Eucalyptus grandis
Eucgr.C02022 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37187249-37188248 Eucalyptus grandis
Eucgr.C02022 2.0kb upstream 2.0kb upstream 4542 true Chr03: 37188249-37192790 Eucalyptus grandis
Eucgr.C02022 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37190791-37192790 Eucalyptus grandis
Eucgr.C02022 2.0kb downstream 2.0kb downstream 4542 true Chr03: 37186249-37190790 Eucalyptus grandis
Eucgr.C02022 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37186249-37188248 Eucalyptus grandis
Eucgr.C02022 5.0kb upstream 5.0kb upstream 7542 true Chr03: 37188249-37195790 Eucalyptus grandis
Eucgr.C02022 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37190791-37195790 Eucalyptus grandis
Eucgr.C02022 5.0kb downstream 5.0kb downstream 7542 true Chr03: 37183249-37190790 Eucalyptus grandis
Eucgr.C02022 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37183249-37188248 Eucalyptus grandis
Eucgr.C02022 10.0kb upstream 10.0kb upstream 12542 true Chr03: 37188249-37200790 Eucalyptus grandis
Eucgr.C02022 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37190791-37200790 Eucalyptus grandis
Eucgr.C02022 10.0kb downstream 10.0kb downstream 12542 true Chr03: 37178249-37190790 Eucalyptus grandis
Eucgr.C02022 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37178249-37188248 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050697 5270 Rosid View MSA
123742620 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.906669 0.0 2.64324    
cufflinks 0.381957 0.0 1.2297 Low Low
cufflinks 0.758616 0.0 2.25465    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.4685 0.0 6.51763   High

0 Strain