Gene : Eucgr.C01940 E. grandis v2.0
Defline:  (1 of 3) PTHR31429:SF3 - WRKY TRANSCRIPTION FACTOR 40-RELATED Genomic Order:  1510
Name:  ? Eucgr.C01940 Secondary Identifier:  ? PAC:32038318
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01940 0.5kb upstream 0.5kb upstream 1980 true Chr03: 33854254-33856233 Eucalyptus grandis
Eucgr.C01940 0.5kb upstream 0.5kb upstream 500 false Chr03: 33854254-33854753 Eucalyptus grandis
Eucgr.C01940 0.5kb downstream 0.5kb downstream 1980 true Chr03: 33854754-33856733 Eucalyptus grandis
Eucgr.C01940 0.5kb downstream 0.5kb downstream 500 false Chr03: 33856234-33856733 Eucalyptus grandis
Eucgr.C01940 1.0kb upstream 1.0kb upstream 2480 true Chr03: 33853754-33856233 Eucalyptus grandis
Eucgr.C01940 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33853754-33854753 Eucalyptus grandis
Eucgr.C01940 1.0kb downstream 1.0kb downstream 2480 true Chr03: 33854754-33857233 Eucalyptus grandis
Eucgr.C01940 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33856234-33857233 Eucalyptus grandis
Eucgr.C01940 2.0kb upstream 2.0kb upstream 3480 true Chr03: 33852754-33856233 Eucalyptus grandis
Eucgr.C01940 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33852754-33854753 Eucalyptus grandis
Eucgr.C01940 2.0kb downstream 2.0kb downstream 3480 true Chr03: 33854754-33858233 Eucalyptus grandis
Eucgr.C01940 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33856234-33858233 Eucalyptus grandis
Eucgr.C01940 5.0kb upstream 5.0kb upstream 6480 true Chr03: 33849754-33856233 Eucalyptus grandis
Eucgr.C01940 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33849754-33854753 Eucalyptus grandis
Eucgr.C01940 5.0kb downstream 5.0kb downstream 6480 true Chr03: 33854754-33861233 Eucalyptus grandis
Eucgr.C01940 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33856234-33861233 Eucalyptus grandis
Eucgr.C01940 10.0kb upstream 10.0kb upstream 11480 true Chr03: 33844754-33856233 Eucalyptus grandis
Eucgr.C01940 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33844754-33854753 Eucalyptus grandis
Eucgr.C01940 10.0kb downstream 10.0kb downstream 11480 true Chr03: 33854754-33866233 Eucalyptus grandis
Eucgr.C01940 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33856234-33866233 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121660207 5273 Angiosperm Singleton cluster - no MSA
124044491 5270 Rosid Singleton cluster - no MSA
123614522 5271 Pentapetalae Singleton cluster - no MSA
122648994 5272 Eudicot Singleton cluster - no MSA
120932176 5274 Embryophyte Singleton cluster - no MSA
122972668 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.37664 0.0 24.8231    
cufflinks 7.96276 0.0 21.4174   Low
cufflinks 9.4601 0.0 25.0899    
cufflinks 22.2559 0.0 54.0755   High
cufflinks 16.2403 0.0 40.6767    
cufflinks 22.5867 0.0 55.1954   High

0 Strain