Gene : Eucgr.C01899 E. grandis v2.0
Defline:  (1 of 1) PTHR32370:SF7 - BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 Genomic Order:  1536
Name:  ? Eucgr.C01899 Secondary Identifier:  ? PAC:32036282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01899 0.5kb upstream 0.5kb upstream 6009 true Chr03: 34602380-34608388 Eucalyptus grandis
Eucgr.C01899 0.5kb upstream 0.5kb upstream 500 false Chr03: 34607889-34608388 Eucalyptus grandis
Eucgr.C01899 0.5kb downstream 0.5kb downstream 6009 true Chr03: 34601880-34607888 Eucalyptus grandis
Eucgr.C01899 0.5kb downstream 0.5kb downstream 500 false Chr03: 34601880-34602379 Eucalyptus grandis
Eucgr.C01899 1.0kb upstream 1.0kb upstream 6509 true Chr03: 34602380-34608888 Eucalyptus grandis
Eucgr.C01899 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34607889-34608888 Eucalyptus grandis
Eucgr.C01899 1.0kb downstream 1.0kb downstream 6509 true Chr03: 34601380-34607888 Eucalyptus grandis
Eucgr.C01899 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34601380-34602379 Eucalyptus grandis
Eucgr.C01899 2.0kb upstream 2.0kb upstream 7509 true Chr03: 34602380-34609888 Eucalyptus grandis
Eucgr.C01899 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34607889-34609888 Eucalyptus grandis
Eucgr.C01899 2.0kb downstream 2.0kb downstream 7509 true Chr03: 34600380-34607888 Eucalyptus grandis
Eucgr.C01899 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34600380-34602379 Eucalyptus grandis
Eucgr.C01899 5.0kb upstream 5.0kb upstream 10509 true Chr03: 34602380-34612888 Eucalyptus grandis
Eucgr.C01899 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34607889-34612888 Eucalyptus grandis
Eucgr.C01899 5.0kb downstream 5.0kb downstream 10509 true Chr03: 34597380-34607888 Eucalyptus grandis
Eucgr.C01899 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34597380-34602379 Eucalyptus grandis
Eucgr.C01899 10.0kb upstream 10.0kb upstream 15509 true Chr03: 34602380-34617888 Eucalyptus grandis
Eucgr.C01899 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34607889-34617888 Eucalyptus grandis
Eucgr.C01899 10.0kb downstream 10.0kb downstream 15509 true Chr03: 34592380-34607888 Eucalyptus grandis
Eucgr.C01899 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34592380-34602379 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067835 5270 Rosid View MSA
123737870 5271 Pentapetalae View MSA
122787128 5272 Eudicot View MSA
122043387 5273 Angiosperm View MSA
121310115 5274 Embryophyte View MSA
123347692 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.8691 0.0 71.1886 High  
cufflinks 17.8958 0.0 39.5795    
cufflinks 27.2944 0.0 60.7427 High  
cufflinks 13.0822 0.0 28.9822    
cufflinks 19.515 0.0 43.1724    
cufflinks 1.48584 0.0 3.92309   Low

0 Strain