Gene : Eucgr.C01794 E. grandis v2.0
Defline:  (1 of 4) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED Genomic Order:  1323
Name:  ? Eucgr.C01794 Secondary Identifier:  ? PAC:32036319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01794 0.5kb upstream 0.5kb upstream 4402 true Chr03: 28688001-28692402 Eucalyptus grandis
Eucgr.C01794 0.5kb upstream 0.5kb upstream 500 false Chr03: 28691903-28692402 Eucalyptus grandis
Eucgr.C01794 0.5kb downstream 0.5kb downstream 4402 true Chr03: 28687501-28691902 Eucalyptus grandis
Eucgr.C01794 0.5kb downstream 0.5kb downstream 500 false Chr03: 28687501-28688000 Eucalyptus grandis
Eucgr.C01794 1.0kb upstream 1.0kb upstream 4902 true Chr03: 28688001-28692902 Eucalyptus grandis
Eucgr.C01794 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28691903-28692902 Eucalyptus grandis
Eucgr.C01794 1.0kb downstream 1.0kb downstream 4902 true Chr03: 28687001-28691902 Eucalyptus grandis
Eucgr.C01794 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28687001-28688000 Eucalyptus grandis
Eucgr.C01794 2.0kb upstream 2.0kb upstream 5902 true Chr03: 28688001-28693902 Eucalyptus grandis
Eucgr.C01794 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28691903-28693902 Eucalyptus grandis
Eucgr.C01794 2.0kb downstream 2.0kb downstream 5902 true Chr03: 28686001-28691902 Eucalyptus grandis
Eucgr.C01794 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28686001-28688000 Eucalyptus grandis
Eucgr.C01794 5.0kb upstream 5.0kb upstream 8902 true Chr03: 28688001-28696902 Eucalyptus grandis
Eucgr.C01794 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28691903-28696902 Eucalyptus grandis
Eucgr.C01794 5.0kb downstream 5.0kb downstream 8902 true Chr03: 28683001-28691902 Eucalyptus grandis
Eucgr.C01794 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28683001-28688000 Eucalyptus grandis
Eucgr.C01794 10.0kb upstream 10.0kb upstream 13902 true Chr03: 28688001-28701902 Eucalyptus grandis
Eucgr.C01794 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28691903-28701902 Eucalyptus grandis
Eucgr.C01794 10.0kb downstream 10.0kb downstream 13902 true Chr03: 28678001-28691902 Eucalyptus grandis
Eucgr.C01794 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28678001-28688000 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070009 5270 Rosid View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.78192 0.0 6.21372   Low
cufflinks 7.73082 0.0 21.3832    
cufflinks 2.1071 0.0 7.22554    
cufflinks 14.9435 0.0 43.6744   High
cufflinks 6.77033 0.0 21.0147    
cufflinks 2.27661 0.0 7.84431    

0 Strain