Gene : Eucgr.C01716 E. grandis v2.0
Defline:  (1 of 2) PTHR15970:SF2 - ELL-ASSOCIATED FACTOR EAF Genomic Order:  1395
Name:  ? Eucgr.C01716 Secondary Identifier:  ? PAC:32037167
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01716 0.5kb upstream 0.5kb upstream 5374 true Chr03: 30018657-30024030 Eucalyptus grandis
Eucgr.C01716 0.5kb upstream 0.5kb upstream 500 false Chr03: 30018657-30019156 Eucalyptus grandis
Eucgr.C01716 0.5kb downstream 0.5kb downstream 5374 true Chr03: 30019157-30024530 Eucalyptus grandis
Eucgr.C01716 0.5kb downstream 0.5kb downstream 500 false Chr03: 30024031-30024530 Eucalyptus grandis
Eucgr.C01716 1.0kb upstream 1.0kb upstream 5874 true Chr03: 30018157-30024030 Eucalyptus grandis
Eucgr.C01716 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30018157-30019156 Eucalyptus grandis
Eucgr.C01716 1.0kb downstream 1.0kb downstream 5874 true Chr03: 30019157-30025030 Eucalyptus grandis
Eucgr.C01716 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30024031-30025030 Eucalyptus grandis
Eucgr.C01716 2.0kb upstream 2.0kb upstream 6874 true Chr03: 30017157-30024030 Eucalyptus grandis
Eucgr.C01716 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30017157-30019156 Eucalyptus grandis
Eucgr.C01716 2.0kb downstream 2.0kb downstream 6874 true Chr03: 30019157-30026030 Eucalyptus grandis
Eucgr.C01716 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30024031-30026030 Eucalyptus grandis
Eucgr.C01716 5.0kb upstream 5.0kb upstream 9874 true Chr03: 30014157-30024030 Eucalyptus grandis
Eucgr.C01716 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30014157-30019156 Eucalyptus grandis
Eucgr.C01716 5.0kb downstream 5.0kb downstream 9874 true Chr03: 30019157-30029030 Eucalyptus grandis
Eucgr.C01716 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30024031-30029030 Eucalyptus grandis
Eucgr.C01716 10.0kb upstream 10.0kb upstream 14874 true Chr03: 30009157-30024030 Eucalyptus grandis
Eucgr.C01716 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30009157-30019156 Eucalyptus grandis
Eucgr.C01716 10.0kb downstream 10.0kb downstream 14874 true Chr03: 30019157-30034030 Eucalyptus grandis
Eucgr.C01716 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30024031-30034030 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060442 5270 Rosid View MSA
123736419 5271 Pentapetalae View MSA
122791922 5272 Eudicot View MSA
122044960 5273 Angiosperm View MSA
121347261 5274 Embryophyte View MSA
123428623 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1977 0.0 38.6242   Low
cufflinks 23.4256 0.0 52.8364    
cufflinks 19.4044 0.0 43.6419    
cufflinks 29.5672 0.0 73.5151   High
cufflinks 28.6158 0.0 70.9938   High
cufflinks 15.4255 0.0 35.4852   Low

0 Strain