Gene : Eucgr.C01720 E. grandis v2.0
Defline:  (1 of 1) PTHR31096:SF21 - ACT DOMAIN-CONTAINING PROTEIN Genomic Order:  1391
Name:  ? Eucgr.C01720 Secondary Identifier:  ? PAC:32038477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01720 0.5kb upstream 0.5kb upstream 3557 true Chr03: 29990575-29994131 Eucalyptus grandis
Eucgr.C01720 0.5kb upstream 0.5kb upstream 500 false Chr03: 29990575-29991074 Eucalyptus grandis
Eucgr.C01720 0.5kb downstream 0.5kb downstream 3557 true Chr03: 29991075-29994631 Eucalyptus grandis
Eucgr.C01720 0.5kb downstream 0.5kb downstream 500 false Chr03: 29994132-29994631 Eucalyptus grandis
Eucgr.C01720 1.0kb upstream 1.0kb upstream 4057 true Chr03: 29990075-29994131 Eucalyptus grandis
Eucgr.C01720 1.0kb upstream 1.0kb upstream 1000 false Chr03: 29990075-29991074 Eucalyptus grandis
Eucgr.C01720 1.0kb downstream 1.0kb downstream 4057 true Chr03: 29991075-29995131 Eucalyptus grandis
Eucgr.C01720 1.0kb downstream 1.0kb downstream 1000 false Chr03: 29994132-29995131 Eucalyptus grandis
Eucgr.C01720 2.0kb upstream 2.0kb upstream 5057 true Chr03: 29989075-29994131 Eucalyptus grandis
Eucgr.C01720 2.0kb upstream 2.0kb upstream 2000 false Chr03: 29989075-29991074 Eucalyptus grandis
Eucgr.C01720 2.0kb downstream 2.0kb downstream 5057 true Chr03: 29991075-29996131 Eucalyptus grandis
Eucgr.C01720 2.0kb downstream 2.0kb downstream 2000 false Chr03: 29994132-29996131 Eucalyptus grandis
Eucgr.C01720 5.0kb upstream 5.0kb upstream 8057 true Chr03: 29986075-29994131 Eucalyptus grandis
Eucgr.C01720 5.0kb upstream 5.0kb upstream 5000 false Chr03: 29986075-29991074 Eucalyptus grandis
Eucgr.C01720 5.0kb downstream 5.0kb downstream 8057 true Chr03: 29991075-29999131 Eucalyptus grandis
Eucgr.C01720 5.0kb downstream 5.0kb downstream 5000 false Chr03: 29994132-29999131 Eucalyptus grandis
Eucgr.C01720 10.0kb upstream 10.0kb upstream 13057 true Chr03: 29981075-29994131 Eucalyptus grandis
Eucgr.C01720 10.0kb upstream 10.0kb upstream 10000 false Chr03: 29981075-29991074 Eucalyptus grandis
Eucgr.C01720 10.0kb downstream 10.0kb downstream 13057 true Chr03: 29991075-30004131 Eucalyptus grandis
Eucgr.C01720 10.0kb downstream 10.0kb downstream 10000 false Chr03: 29994132-30004131 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026657 5273 Angiosperm View MSA
124068952 5270 Rosid View MSA
123740265 5271 Pentapetalae View MSA
122790805 5272 Eudicot View MSA
121296457 5274 Embryophyte View MSA
123334616 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138613 0.0 0.518311 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.38028 0.0 3.88196   High
cufflinks 0.390324 0.0 1.26947 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain