Gene : Eucgr.C01740 E. grandis v2.0
Defline:  (1 of 1) PTHR31356:SF4 - L-ASCORBATE PEROXIDASE 6-RELATED Genomic Order:  1374
Name:  ? Eucgr.C01740 Secondary Identifier:  ? PAC:32038209
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2261 Eucalyptus grandis pathologic  
Egrandis PWY-6959 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01740 0.5kb upstream 0.5kb upstream 5270 true Chr03: 29516369-29521638 Eucalyptus grandis
Eucgr.C01740 0.5kb upstream 0.5kb upstream 500 false Chr03: 29521139-29521638 Eucalyptus grandis
Eucgr.C01740 0.5kb downstream 0.5kb downstream 5270 true Chr03: 29515869-29521138 Eucalyptus grandis
Eucgr.C01740 0.5kb downstream 0.5kb downstream 500 false Chr03: 29515869-29516368 Eucalyptus grandis
Eucgr.C01740 1.0kb upstream 1.0kb upstream 5770 true Chr03: 29516369-29522138 Eucalyptus grandis
Eucgr.C01740 1.0kb upstream 1.0kb upstream 1000 false Chr03: 29521139-29522138 Eucalyptus grandis
Eucgr.C01740 1.0kb downstream 1.0kb downstream 5770 true Chr03: 29515369-29521138 Eucalyptus grandis
Eucgr.C01740 1.0kb downstream 1.0kb downstream 1000 false Chr03: 29515369-29516368 Eucalyptus grandis
Eucgr.C01740 2.0kb upstream 2.0kb upstream 6770 true Chr03: 29516369-29523138 Eucalyptus grandis
Eucgr.C01740 2.0kb upstream 2.0kb upstream 2000 false Chr03: 29521139-29523138 Eucalyptus grandis
Eucgr.C01740 2.0kb downstream 2.0kb downstream 6770 true Chr03: 29514369-29521138 Eucalyptus grandis
Eucgr.C01740 2.0kb downstream 2.0kb downstream 2000 false Chr03: 29514369-29516368 Eucalyptus grandis
Eucgr.C01740 5.0kb upstream 5.0kb upstream 9770 true Chr03: 29516369-29526138 Eucalyptus grandis
Eucgr.C01740 5.0kb upstream 5.0kb upstream 5000 false Chr03: 29521139-29526138 Eucalyptus grandis
Eucgr.C01740 5.0kb downstream 5.0kb downstream 9770 true Chr03: 29511369-29521138 Eucalyptus grandis
Eucgr.C01740 5.0kb downstream 5.0kb downstream 5000 false Chr03: 29511369-29516368 Eucalyptus grandis
Eucgr.C01740 10.0kb upstream 10.0kb upstream 14770 true Chr03: 29516369-29531138 Eucalyptus grandis
Eucgr.C01740 10.0kb upstream 10.0kb upstream 10000 false Chr03: 29521139-29531138 Eucalyptus grandis
Eucgr.C01740 10.0kb downstream 10.0kb downstream 14770 true Chr03: 29506369-29521138 Eucalyptus grandis
Eucgr.C01740 10.0kb downstream 10.0kb downstream 10000 false Chr03: 29506369-29516368 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065739 5270 Rosid View MSA
123737315 5271 Pentapetalae View MSA
122787755 5272 Eudicot View MSA
122044466 5273 Angiosperm View MSA
121347690 5274 Embryophyte View MSA
123425529 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29588 0.0 3.95177    
cufflinks 0.402491 0.0 1.55719 Low Low
cufflinks 0.93211 0.0 3.00569    
cufflinks 0.701257 0.0 2.11724    
cufflinks 1.95539 0.0 5.61266    
cufflinks 4.48833 0.0 11.4182   High

0 Strain