Gene : Eucgr.C01702 E. grandis v2.0
Defline:  (1 of 3) PTHR13109 - NEUROCHONDRIN Genomic Order:  1405
Name:  ? Eucgr.C01702 Secondary Identifier:  ? PAC:32038155
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01702 0.5kb upstream 0.5kb upstream 8764 true Chr03: 30169820-30178583 Eucalyptus grandis
Eucgr.C01702 0.5kb upstream 0.5kb upstream 500 false Chr03: 30178084-30178583 Eucalyptus grandis
Eucgr.C01702 0.5kb downstream 0.5kb downstream 8764 true Chr03: 30169320-30178083 Eucalyptus grandis
Eucgr.C01702 0.5kb downstream 0.5kb downstream 500 false Chr03: 30169320-30169819 Eucalyptus grandis
Eucgr.C01702 1.0kb upstream 1.0kb upstream 9264 true Chr03: 30169820-30179083 Eucalyptus grandis
Eucgr.C01702 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30178084-30179083 Eucalyptus grandis
Eucgr.C01702 1.0kb downstream 1.0kb downstream 9264 true Chr03: 30168820-30178083 Eucalyptus grandis
Eucgr.C01702 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30168820-30169819 Eucalyptus grandis
Eucgr.C01702 2.0kb upstream 2.0kb upstream 10264 true Chr03: 30169820-30180083 Eucalyptus grandis
Eucgr.C01702 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30178084-30180083 Eucalyptus grandis
Eucgr.C01702 2.0kb downstream 2.0kb downstream 10264 true Chr03: 30167820-30178083 Eucalyptus grandis
Eucgr.C01702 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30167820-30169819 Eucalyptus grandis
Eucgr.C01702 5.0kb upstream 5.0kb upstream 13264 true Chr03: 30169820-30183083 Eucalyptus grandis
Eucgr.C01702 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30178084-30183083 Eucalyptus grandis
Eucgr.C01702 5.0kb downstream 5.0kb downstream 13264 true Chr03: 30164820-30178083 Eucalyptus grandis
Eucgr.C01702 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30164820-30169819 Eucalyptus grandis
Eucgr.C01702 10.0kb upstream 10.0kb upstream 18264 true Chr03: 30169820-30188083 Eucalyptus grandis
Eucgr.C01702 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30178084-30188083 Eucalyptus grandis
Eucgr.C01702 10.0kb downstream 10.0kb downstream 18264 true Chr03: 30159820-30178083 Eucalyptus grandis
Eucgr.C01702 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30159820-30169819 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063922 5270 Rosid View MSA
123739094 5271 Pentapetalae View MSA
122786343 5272 Eudicot View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.49373 0.0 4.12746    
cufflinks 3.25547 0.0 8.22765    
cufflinks 2.22379 0.0 5.87441    
cufflinks 4.31346 0.0 10.6075    
cufflinks 5.60111 0.0 13.4821    
cufflinks 0.359205 0.0 1.18281 Low Low

0 Strain