Gene : Eucgr.C01625 E. grandis v2.0
Defline:  (1 of 3) PTHR13109 - NEUROCHONDRIN Genomic Order:  1458
Name:  ? Eucgr.C01625 Secondary Identifier:  ? PAC:32039769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01625 0.5kb upstream 0.5kb upstream 5426 true Chr03: 31878132-31883557 Eucalyptus grandis
Eucgr.C01625 0.5kb upstream 0.5kb upstream 500 false Chr03: 31878132-31878631 Eucalyptus grandis
Eucgr.C01625 0.5kb downstream 0.5kb downstream 5426 true Chr03: 31878632-31884057 Eucalyptus grandis
Eucgr.C01625 0.5kb downstream 0.5kb downstream 500 false Chr03: 31883558-31884057 Eucalyptus grandis
Eucgr.C01625 1.0kb upstream 1.0kb upstream 5926 true Chr03: 31877632-31883557 Eucalyptus grandis
Eucgr.C01625 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31877632-31878631 Eucalyptus grandis
Eucgr.C01625 1.0kb downstream 1.0kb downstream 5926 true Chr03: 31878632-31884557 Eucalyptus grandis
Eucgr.C01625 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31883558-31884557 Eucalyptus grandis
Eucgr.C01625 2.0kb upstream 2.0kb upstream 6926 true Chr03: 31876632-31883557 Eucalyptus grandis
Eucgr.C01625 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31876632-31878631 Eucalyptus grandis
Eucgr.C01625 2.0kb downstream 2.0kb downstream 6926 true Chr03: 31878632-31885557 Eucalyptus grandis
Eucgr.C01625 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31883558-31885557 Eucalyptus grandis
Eucgr.C01625 5.0kb upstream 5.0kb upstream 9926 true Chr03: 31873632-31883557 Eucalyptus grandis
Eucgr.C01625 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31873632-31878631 Eucalyptus grandis
Eucgr.C01625 5.0kb downstream 5.0kb downstream 9926 true Chr03: 31878632-31888557 Eucalyptus grandis
Eucgr.C01625 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31883558-31888557 Eucalyptus grandis
Eucgr.C01625 10.0kb upstream 10.0kb upstream 14926 true Chr03: 31868632-31883557 Eucalyptus grandis
Eucgr.C01625 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31868632-31878631 Eucalyptus grandis
Eucgr.C01625 10.0kb downstream 10.0kb downstream 14926 true Chr03: 31878632-31893557 Eucalyptus grandis
Eucgr.C01625 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31883558-31893557 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063922 5270 Rosid View MSA
123739094 5271 Pentapetalae View MSA
122786343 5272 Eudicot View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.59463 0.0 9.27966    
cufflinks 11.0733 0.0 25.4165   High
cufflinks 3.57662 0.0 9.1784    
cufflinks 4.44914 0.0 11.1106    
cufflinks 9.01404 0.0 21.1322   High
cufflinks 3.70254 0.0 9.61012    

0 Strain