Gene : Eucgr.C01665 E. grandis v2.0
Defline:  (1 of 10) PTHR10797 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT Genomic Order:  1432
Name:  ? Eucgr.C01665 Secondary Identifier:  ? PAC:32036535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01665 0.5kb upstream 0.5kb upstream 2023 true Chr03: 30896884-30898906 Eucalyptus grandis
Eucgr.C01665 0.5kb upstream 0.5kb upstream 500 false Chr03: 30898407-30898906 Eucalyptus grandis
Eucgr.C01665 0.5kb downstream 0.5kb downstream 2023 true Chr03: 30896384-30898406 Eucalyptus grandis
Eucgr.C01665 0.5kb downstream 0.5kb downstream 500 false Chr03: 30896384-30896883 Eucalyptus grandis
Eucgr.C01665 1.0kb upstream 1.0kb upstream 2523 true Chr03: 30896884-30899406 Eucalyptus grandis
Eucgr.C01665 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30898407-30899406 Eucalyptus grandis
Eucgr.C01665 1.0kb downstream 1.0kb downstream 2523 true Chr03: 30895884-30898406 Eucalyptus grandis
Eucgr.C01665 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30895884-30896883 Eucalyptus grandis
Eucgr.C01665 2.0kb upstream 2.0kb upstream 3523 true Chr03: 30896884-30900406 Eucalyptus grandis
Eucgr.C01665 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30898407-30900406 Eucalyptus grandis
Eucgr.C01665 2.0kb downstream 2.0kb downstream 3523 true Chr03: 30894884-30898406 Eucalyptus grandis
Eucgr.C01665 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30894884-30896883 Eucalyptus grandis
Eucgr.C01665 5.0kb upstream 5.0kb upstream 6523 true Chr03: 30896884-30903406 Eucalyptus grandis
Eucgr.C01665 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30898407-30903406 Eucalyptus grandis
Eucgr.C01665 5.0kb downstream 5.0kb downstream 6523 true Chr03: 30891884-30898406 Eucalyptus grandis
Eucgr.C01665 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30891884-30896883 Eucalyptus grandis
Eucgr.C01665 10.0kb upstream 10.0kb upstream 11523 true Chr03: 30896884-30908406 Eucalyptus grandis
Eucgr.C01665 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30898407-30908406 Eucalyptus grandis
Eucgr.C01665 10.0kb downstream 10.0kb downstream 11523 true Chr03: 30886884-30898406 Eucalyptus grandis
Eucgr.C01665 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30886884-30896883 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069772 5270 Rosid View MSA
123751121 5271 Pentapetalae View MSA
122791154 5272 Eudicot View MSA
122043623 5273 Angiosperm View MSA
123429113 5275 Viridiplantae View MSA
121348051 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.1533 0.0 106.593 High  
cufflinks 67.6264 0.0 151.066 High  
cufflinks 42.0963 0.0 93.0996 High  
cufflinks 70.8925 0.0 158.542 High High
cufflinks 52.5607 0.0 116.436 High  
cufflinks 32.0167 0.0 70.921   Low

0 Strain