Gene : Eucgr.C01579 E. grandis v2.0
Defline:  (1 of 1) PTHR11134:SF4 - AP-4 COMPLEX SUBUNIT BETA-1 Genomic Order:  1259
Name:  ? Eucgr.C01579 Secondary Identifier:  ? PAC:32036887
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01579 0.5kb upstream 0.5kb upstream 8359 true Chr03: 26179743-26188101 Eucalyptus grandis
Eucgr.C01579 0.5kb upstream 0.5kb upstream 500 false Chr03: 26187602-26188101 Eucalyptus grandis
Eucgr.C01579 0.5kb downstream 0.5kb downstream 8359 true Chr03: 26179243-26187601 Eucalyptus grandis
Eucgr.C01579 0.5kb downstream 0.5kb downstream 500 false Chr03: 26179243-26179742 Eucalyptus grandis
Eucgr.C01579 1.0kb upstream 1.0kb upstream 8859 true Chr03: 26179743-26188601 Eucalyptus grandis
Eucgr.C01579 1.0kb upstream 1.0kb upstream 1000 false Chr03: 26187602-26188601 Eucalyptus grandis
Eucgr.C01579 1.0kb downstream 1.0kb downstream 8859 true Chr03: 26178743-26187601 Eucalyptus grandis
Eucgr.C01579 1.0kb downstream 1.0kb downstream 1000 false Chr03: 26178743-26179742 Eucalyptus grandis
Eucgr.C01579 2.0kb upstream 2.0kb upstream 9859 true Chr03: 26179743-26189601 Eucalyptus grandis
Eucgr.C01579 2.0kb upstream 2.0kb upstream 2000 false Chr03: 26187602-26189601 Eucalyptus grandis
Eucgr.C01579 2.0kb downstream 2.0kb downstream 9859 true Chr03: 26177743-26187601 Eucalyptus grandis
Eucgr.C01579 2.0kb downstream 2.0kb downstream 2000 false Chr03: 26177743-26179742 Eucalyptus grandis
Eucgr.C01579 5.0kb upstream 5.0kb upstream 12859 true Chr03: 26179743-26192601 Eucalyptus grandis
Eucgr.C01579 5.0kb upstream 5.0kb upstream 5000 false Chr03: 26187602-26192601 Eucalyptus grandis
Eucgr.C01579 5.0kb downstream 5.0kb downstream 12859 true Chr03: 26174743-26187601 Eucalyptus grandis
Eucgr.C01579 5.0kb downstream 5.0kb downstream 5000 false Chr03: 26174743-26179742 Eucalyptus grandis
Eucgr.C01579 10.0kb upstream 10.0kb upstream 17859 true Chr03: 26179743-26197601 Eucalyptus grandis
Eucgr.C01579 10.0kb upstream 10.0kb upstream 10000 false Chr03: 26187602-26197601 Eucalyptus grandis
Eucgr.C01579 10.0kb downstream 10.0kb downstream 17859 true Chr03: 26169743-26187601 Eucalyptus grandis
Eucgr.C01579 10.0kb downstream 10.0kb downstream 10000 false Chr03: 26169743-26179742 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040917 5273 Angiosperm View MSA
124062984 5270 Rosid View MSA
123740433 5271 Pentapetalae View MSA
122790083 5272 Eudicot View MSA
121346542 5274 Embryophyte View MSA
123428647 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7605 0.0 26.3372    
cufflinks 20.146 0.0 46.0235   High
cufflinks 11.0293 0.0 24.8177    
cufflinks 20.3811 0.0 51.1507   High
cufflinks 10.2653 0.0 23.1325   Low
cufflinks 13.8615 0.0 31.1882    

0 Strain