Gene : Eucgr.C01589 E. grandis v2.0
Defline:  (1 of 5) PTHR13856:SF78 - ENTH/VHS/GAT FAMILY PROTEIN Genomic Order:  1249
Name:  ? Eucgr.C01589 Secondary Identifier:  ? PAC:32036476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01589 0.5kb upstream 0.5kb upstream 10553 true Chr03: 26051843-26062395 Eucalyptus grandis
Eucgr.C01589 0.5kb upstream 0.5kb upstream 500 false Chr03: 26061896-26062395 Eucalyptus grandis
Eucgr.C01589 0.5kb downstream 0.5kb downstream 10553 true Chr03: 26051343-26061895 Eucalyptus grandis
Eucgr.C01589 0.5kb downstream 0.5kb downstream 500 false Chr03: 26051343-26051842 Eucalyptus grandis
Eucgr.C01589 1.0kb upstream 1.0kb upstream 11053 true Chr03: 26051843-26062895 Eucalyptus grandis
Eucgr.C01589 1.0kb upstream 1.0kb upstream 1000 false Chr03: 26061896-26062895 Eucalyptus grandis
Eucgr.C01589 1.0kb downstream 1.0kb downstream 11053 true Chr03: 26050843-26061895 Eucalyptus grandis
Eucgr.C01589 1.0kb downstream 1.0kb downstream 1000 false Chr03: 26050843-26051842 Eucalyptus grandis
Eucgr.C01589 2.0kb upstream 2.0kb upstream 12053 true Chr03: 26051843-26063895 Eucalyptus grandis
Eucgr.C01589 2.0kb upstream 2.0kb upstream 2000 false Chr03: 26061896-26063895 Eucalyptus grandis
Eucgr.C01589 2.0kb downstream 2.0kb downstream 12053 true Chr03: 26049843-26061895 Eucalyptus grandis
Eucgr.C01589 2.0kb downstream 2.0kb downstream 2000 false Chr03: 26049843-26051842 Eucalyptus grandis
Eucgr.C01589 5.0kb upstream 5.0kb upstream 15053 true Chr03: 26051843-26066895 Eucalyptus grandis
Eucgr.C01589 5.0kb upstream 5.0kb upstream 5000 false Chr03: 26061896-26066895 Eucalyptus grandis
Eucgr.C01589 5.0kb downstream 5.0kb downstream 15053 true Chr03: 26046843-26061895 Eucalyptus grandis
Eucgr.C01589 5.0kb downstream 5.0kb downstream 5000 false Chr03: 26046843-26051842 Eucalyptus grandis
Eucgr.C01589 10.0kb upstream 10.0kb upstream 20053 true Chr03: 26051843-26071895 Eucalyptus grandis
Eucgr.C01589 10.0kb upstream 10.0kb upstream 10000 false Chr03: 26061896-26071895 Eucalyptus grandis
Eucgr.C01589 10.0kb downstream 10.0kb downstream 20053 true Chr03: 26041843-26061895 Eucalyptus grandis
Eucgr.C01589 10.0kb downstream 10.0kb downstream 10000 false Chr03: 26041843-26051842 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064197 5270 Rosid View MSA
123738981 5271 Pentapetalae View MSA
122792508 5272 Eudicot View MSA
122051153 5273 Angiosperm View MSA
121349159 5274 Embryophyte View MSA
123427882 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9832 0.0 39.7729    
cufflinks 43.0801 0.0 98.1704 High High
cufflinks 21.9484 0.0 48.6508    
cufflinks 37.9687 0.0 85.9046 High High
cufflinks 20.1777 0.0 44.682    
cufflinks 21.6646 0.0 47.983    

0 Strain