Gene : Eucgr.C01530 E. grandis v2.0
Defline:  (1 of 2) PTHR18804:SF7 - RIBOSOMAL PROTEIN Genomic Order:  1059
Name:  ? Eucgr.C01530 Secondary Identifier:  ? PAC:32037501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01530 0.5kb upstream 0.5kb upstream 2886 true Chr03: 20977906-20980791 Eucalyptus grandis
Eucgr.C01530 0.5kb upstream 0.5kb upstream 500 false Chr03: 20977906-20978405 Eucalyptus grandis
Eucgr.C01530 0.5kb downstream 0.5kb downstream 2886 true Chr03: 20978406-20981291 Eucalyptus grandis
Eucgr.C01530 0.5kb downstream 0.5kb downstream 500 false Chr03: 20980792-20981291 Eucalyptus grandis
Eucgr.C01530 1.0kb upstream 1.0kb upstream 3386 true Chr03: 20977406-20980791 Eucalyptus grandis
Eucgr.C01530 1.0kb upstream 1.0kb upstream 1000 false Chr03: 20977406-20978405 Eucalyptus grandis
Eucgr.C01530 1.0kb downstream 1.0kb downstream 3386 true Chr03: 20978406-20981791 Eucalyptus grandis
Eucgr.C01530 1.0kb downstream 1.0kb downstream 1000 false Chr03: 20980792-20981791 Eucalyptus grandis
Eucgr.C01530 2.0kb upstream 2.0kb upstream 4386 true Chr03: 20976406-20980791 Eucalyptus grandis
Eucgr.C01530 2.0kb upstream 2.0kb upstream 2000 false Chr03: 20976406-20978405 Eucalyptus grandis
Eucgr.C01530 2.0kb downstream 2.0kb downstream 4386 true Chr03: 20978406-20982791 Eucalyptus grandis
Eucgr.C01530 2.0kb downstream 2.0kb downstream 2000 false Chr03: 20980792-20982791 Eucalyptus grandis
Eucgr.C01530 5.0kb upstream 5.0kb upstream 7386 true Chr03: 20973406-20980791 Eucalyptus grandis
Eucgr.C01530 5.0kb upstream 5.0kb upstream 5000 false Chr03: 20973406-20978405 Eucalyptus grandis
Eucgr.C01530 5.0kb downstream 5.0kb downstream 7386 true Chr03: 20978406-20985791 Eucalyptus grandis
Eucgr.C01530 5.0kb downstream 5.0kb downstream 5000 false Chr03: 20980792-20985791 Eucalyptus grandis
Eucgr.C01530 10.0kb upstream 10.0kb upstream 12386 true Chr03: 20968406-20980791 Eucalyptus grandis
Eucgr.C01530 10.0kb upstream 10.0kb upstream 10000 false Chr03: 20968406-20978405 Eucalyptus grandis
Eucgr.C01530 10.0kb downstream 10.0kb downstream 12386 true Chr03: 20978406-20990791 Eucalyptus grandis
Eucgr.C01530 10.0kb downstream 10.0kb downstream 10000 false Chr03: 20980792-20990791 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061900 5270 Rosid View MSA
123740045 5271 Pentapetalae View MSA
122796422 5272 Eudicot View MSA
122050877 5273 Angiosperm View MSA
121347060 5274 Embryophyte View MSA
123428353 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45327 0.0 18.4819    
cufflinks 2.81816 0.0 7.65308   Low
cufflinks 6.07644 0.0 15.3692    
cufflinks 6.55141 0.0 16.3631    
cufflinks 13.0368 0.0 30.5664   High
cufflinks 3.77216 0.0 10.0471    

0 Strain