Gene : Eucgr.C02681 E. grandis v2.0
Defline:  (1 of 4) 2.5.1.112//2.5.1.27//2.5.1.75 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase // Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase // tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  2158
Name:  ? Eucgr.C02681 Secondary Identifier:  ? PAC:32039287
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2681 Eucalyptus grandis pathologic  
Egrandis PWY-2781 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02681 0.5kb upstream 0.5kb upstream 1433 true Chr03: 53082345-53083777 Eucalyptus grandis
Eucgr.C02681 0.5kb upstream 0.5kb upstream 500 false Chr03: 53082345-53082844 Eucalyptus grandis
Eucgr.C02681 0.5kb downstream 0.5kb downstream 1433 true Chr03: 53082845-53084277 Eucalyptus grandis
Eucgr.C02681 0.5kb downstream 0.5kb downstream 500 false Chr03: 53083778-53084277 Eucalyptus grandis
Eucgr.C02681 1.0kb upstream 1.0kb upstream 1933 true Chr03: 53081845-53083777 Eucalyptus grandis
Eucgr.C02681 1.0kb upstream 1.0kb upstream 1000 false Chr03: 53081845-53082844 Eucalyptus grandis
Eucgr.C02681 1.0kb downstream 1.0kb downstream 1933 true Chr03: 53082845-53084777 Eucalyptus grandis
Eucgr.C02681 1.0kb downstream 1.0kb downstream 1000 false Chr03: 53083778-53084777 Eucalyptus grandis
Eucgr.C02681 2.0kb upstream 2.0kb upstream 2933 true Chr03: 53080845-53083777 Eucalyptus grandis
Eucgr.C02681 2.0kb upstream 2.0kb upstream 2000 false Chr03: 53080845-53082844 Eucalyptus grandis
Eucgr.C02681 2.0kb downstream 2.0kb downstream 2933 true Chr03: 53082845-53085777 Eucalyptus grandis
Eucgr.C02681 2.0kb downstream 2.0kb downstream 2000 false Chr03: 53083778-53085777 Eucalyptus grandis
Eucgr.C02681 5.0kb upstream 5.0kb upstream 5933 true Chr03: 53077845-53083777 Eucalyptus grandis
Eucgr.C02681 5.0kb upstream 5.0kb upstream 5000 false Chr03: 53077845-53082844 Eucalyptus grandis
Eucgr.C02681 5.0kb downstream 5.0kb downstream 5933 true Chr03: 53082845-53088777 Eucalyptus grandis
Eucgr.C02681 5.0kb downstream 5.0kb downstream 5000 false Chr03: 53083778-53088777 Eucalyptus grandis
Eucgr.C02681 10.0kb upstream 10.0kb upstream 10933 true Chr03: 53072845-53083777 Eucalyptus grandis
Eucgr.C02681 10.0kb upstream 10.0kb upstream 10000 false Chr03: 53072845-53082844 Eucalyptus grandis
Eucgr.C02681 10.0kb downstream 10.0kb downstream 10933 true Chr03: 53082845-53093777 Eucalyptus grandis
Eucgr.C02681 10.0kb downstream 10.0kb downstream 10000 false Chr03: 53083778-53093777 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061925 5270 Rosid View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain