Gene : Eucgr.C02662 E. grandis v2.0
Defline:  (1 of 2) PTHR12663:SF3 - ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2145
Name:  ? Eucgr.C02662 Secondary Identifier:  ? PAC:32036213
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02662 0.5kb upstream 0.5kb upstream 9345 true Chr03: 52881237-52890581 Eucalyptus grandis
Eucgr.C02662 0.5kb upstream 0.5kb upstream 500 false Chr03: 52890082-52890581 Eucalyptus grandis
Eucgr.C02662 0.5kb downstream 0.5kb downstream 9345 true Chr03: 52880737-52890081 Eucalyptus grandis
Eucgr.C02662 0.5kb downstream 0.5kb downstream 500 false Chr03: 52880737-52881236 Eucalyptus grandis
Eucgr.C02662 1.0kb upstream 1.0kb upstream 9845 true Chr03: 52881237-52891081 Eucalyptus grandis
Eucgr.C02662 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52890082-52891081 Eucalyptus grandis
Eucgr.C02662 1.0kb downstream 1.0kb downstream 9845 true Chr03: 52880237-52890081 Eucalyptus grandis
Eucgr.C02662 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52880237-52881236 Eucalyptus grandis
Eucgr.C02662 2.0kb upstream 2.0kb upstream 10845 true Chr03: 52881237-52892081 Eucalyptus grandis
Eucgr.C02662 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52890082-52892081 Eucalyptus grandis
Eucgr.C02662 2.0kb downstream 2.0kb downstream 10845 true Chr03: 52879237-52890081 Eucalyptus grandis
Eucgr.C02662 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52879237-52881236 Eucalyptus grandis
Eucgr.C02662 5.0kb upstream 5.0kb upstream 13845 true Chr03: 52881237-52895081 Eucalyptus grandis
Eucgr.C02662 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52890082-52895081 Eucalyptus grandis
Eucgr.C02662 5.0kb downstream 5.0kb downstream 13845 true Chr03: 52876237-52890081 Eucalyptus grandis
Eucgr.C02662 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52876237-52881236 Eucalyptus grandis
Eucgr.C02662 10.0kb upstream 10.0kb upstream 18845 true Chr03: 52881237-52900081 Eucalyptus grandis
Eucgr.C02662 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52890082-52900081 Eucalyptus grandis
Eucgr.C02662 10.0kb downstream 10.0kb downstream 18845 true Chr03: 52871237-52890081 Eucalyptus grandis
Eucgr.C02662 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52871237-52881236 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073544 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6373 0.0 27.9495    
cufflinks 5.89816 0.0 13.3058    
cufflinks 12.9705 0.0 28.6835    
cufflinks 2.52894 0.0 6.08164   Low
cufflinks 5.19697 0.0 11.8099    
cufflinks 12.1137 0.0 26.8072    

0 Strain