Gene : Eucgr.C02613 E. grandis v2.0
Defline:  (1 of 3) PTHR11941:SF96 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL Genomic Order:  2105
Name:  ? Eucgr.C02613 Secondary Identifier:  ? PAC:32036088
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7574 Eucalyptus grandis pathologic  
Egrandis VALDEG-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02613 0.5kb upstream 0.5kb upstream 7955 true Chr03: 51743563-51751517 Eucalyptus grandis
Eucgr.C02613 0.5kb upstream 0.5kb upstream 500 false Chr03: 51743563-51744062 Eucalyptus grandis
Eucgr.C02613 0.5kb downstream 0.5kb downstream 7955 true Chr03: 51744063-51752017 Eucalyptus grandis
Eucgr.C02613 0.5kb downstream 0.5kb downstream 500 false Chr03: 51751518-51752017 Eucalyptus grandis
Eucgr.C02613 1.0kb upstream 1.0kb upstream 8455 true Chr03: 51743063-51751517 Eucalyptus grandis
Eucgr.C02613 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51743063-51744062 Eucalyptus grandis
Eucgr.C02613 1.0kb downstream 1.0kb downstream 8455 true Chr03: 51744063-51752517 Eucalyptus grandis
Eucgr.C02613 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51751518-51752517 Eucalyptus grandis
Eucgr.C02613 2.0kb upstream 2.0kb upstream 9455 true Chr03: 51742063-51751517 Eucalyptus grandis
Eucgr.C02613 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51742063-51744062 Eucalyptus grandis
Eucgr.C02613 2.0kb downstream 2.0kb downstream 9455 true Chr03: 51744063-51753517 Eucalyptus grandis
Eucgr.C02613 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51751518-51753517 Eucalyptus grandis
Eucgr.C02613 5.0kb upstream 5.0kb upstream 12455 true Chr03: 51739063-51751517 Eucalyptus grandis
Eucgr.C02613 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51739063-51744062 Eucalyptus grandis
Eucgr.C02613 5.0kb downstream 5.0kb downstream 12455 true Chr03: 51744063-51756517 Eucalyptus grandis
Eucgr.C02613 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51751518-51756517 Eucalyptus grandis
Eucgr.C02613 10.0kb upstream 10.0kb upstream 17455 true Chr03: 51734063-51751517 Eucalyptus grandis
Eucgr.C02613 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51734063-51744062 Eucalyptus grandis
Eucgr.C02613 10.0kb downstream 10.0kb downstream 17455 true Chr03: 51744063-51761517 Eucalyptus grandis
Eucgr.C02613 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51751518-51761517 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062114 5270 Rosid View MSA
123739343 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.323 0.0 17.5449   High
cufflinks 1.08541 0.0 3.13246   Low
cufflinks 6.4381 0.0 15.592   High
cufflinks 1.8706 0.0 5.10788    
cufflinks 2.32296 0.0 6.22239    
cufflinks 3.71986 0.0 9.57098    

0 Strain