Gene : Eucgr.C02595 E. grandis v2.0
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Genomic Order:  2089
Name:  ? Eucgr.C02595 Secondary Identifier:  ? PAC:32037397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02595 0.5kb upstream 0.5kb upstream 1769 true Chr03: 51569692-51571460 Eucalyptus grandis
Eucgr.C02595 0.5kb upstream 0.5kb upstream 500 false Chr03: 51569692-51570191 Eucalyptus grandis
Eucgr.C02595 0.5kb downstream 0.5kb downstream 1769 true Chr03: 51570192-51571960 Eucalyptus grandis
Eucgr.C02595 0.5kb downstream 0.5kb downstream 500 false Chr03: 51571461-51571960 Eucalyptus grandis
Eucgr.C02595 1.0kb upstream 1.0kb upstream 2269 true Chr03: 51569192-51571460 Eucalyptus grandis
Eucgr.C02595 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51569192-51570191 Eucalyptus grandis
Eucgr.C02595 1.0kb downstream 1.0kb downstream 2269 true Chr03: 51570192-51572460 Eucalyptus grandis
Eucgr.C02595 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51571461-51572460 Eucalyptus grandis
Eucgr.C02595 2.0kb upstream 2.0kb upstream 3269 true Chr03: 51568192-51571460 Eucalyptus grandis
Eucgr.C02595 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51568192-51570191 Eucalyptus grandis
Eucgr.C02595 2.0kb downstream 2.0kb downstream 3269 true Chr03: 51570192-51573460 Eucalyptus grandis
Eucgr.C02595 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51571461-51573460 Eucalyptus grandis
Eucgr.C02595 5.0kb upstream 5.0kb upstream 6269 true Chr03: 51565192-51571460 Eucalyptus grandis
Eucgr.C02595 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51565192-51570191 Eucalyptus grandis
Eucgr.C02595 5.0kb downstream 5.0kb downstream 6269 true Chr03: 51570192-51576460 Eucalyptus grandis
Eucgr.C02595 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51571461-51576460 Eucalyptus grandis
Eucgr.C02595 10.0kb upstream 10.0kb upstream 11269 true Chr03: 51560192-51571460 Eucalyptus grandis
Eucgr.C02595 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51560192-51570191 Eucalyptus grandis
Eucgr.C02595 10.0kb downstream 10.0kb downstream 11269 true Chr03: 51570192-51581460 Eucalyptus grandis
Eucgr.C02595 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51571461-51581460 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066786 5270 Rosid View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.6107 0.0 37.5312    
cufflinks 7.97803 0.0 19.1186   Low
cufflinks 18.826 0.0 42.3555    
cufflinks 19.7935 0.0 44.423    
cufflinks 20.6444 0.0 46.287    
cufflinks 13.106 0.0 29.9562    

0 Strain