Gene : Eucgr.C02572 E. grandis v2.0
Defline:  (1 of 4) PTHR32100:SF10 - OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC Genomic Order:  2071
Name:  ? Eucgr.C02572 Secondary Identifier:  ? PAC:32039975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02572 0.5kb upstream 0.5kb upstream 6237 true Chr03: 51255798-51262034 Eucalyptus grandis
Eucgr.C02572 0.5kb upstream 0.5kb upstream 500 false Chr03: 51261535-51262034 Eucalyptus grandis
Eucgr.C02572 0.5kb downstream 0.5kb downstream 6237 true Chr03: 51255298-51261534 Eucalyptus grandis
Eucgr.C02572 0.5kb downstream 0.5kb downstream 500 false Chr03: 51255298-51255797 Eucalyptus grandis
Eucgr.C02572 1.0kb upstream 1.0kb upstream 6737 true Chr03: 51255798-51262534 Eucalyptus grandis
Eucgr.C02572 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51261535-51262534 Eucalyptus grandis
Eucgr.C02572 1.0kb downstream 1.0kb downstream 6737 true Chr03: 51254798-51261534 Eucalyptus grandis
Eucgr.C02572 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51254798-51255797 Eucalyptus grandis
Eucgr.C02572 2.0kb upstream 2.0kb upstream 7737 true Chr03: 51255798-51263534 Eucalyptus grandis
Eucgr.C02572 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51261535-51263534 Eucalyptus grandis
Eucgr.C02572 2.0kb downstream 2.0kb downstream 7737 true Chr03: 51253798-51261534 Eucalyptus grandis
Eucgr.C02572 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51253798-51255797 Eucalyptus grandis
Eucgr.C02572 5.0kb upstream 5.0kb upstream 10737 true Chr03: 51255798-51266534 Eucalyptus grandis
Eucgr.C02572 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51261535-51266534 Eucalyptus grandis
Eucgr.C02572 5.0kb downstream 5.0kb downstream 10737 true Chr03: 51250798-51261534 Eucalyptus grandis
Eucgr.C02572 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51250798-51255797 Eucalyptus grandis
Eucgr.C02572 10.0kb upstream 10.0kb upstream 15737 true Chr03: 51255798-51271534 Eucalyptus grandis
Eucgr.C02572 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51261535-51271534 Eucalyptus grandis
Eucgr.C02572 10.0kb downstream 10.0kb downstream 15737 true Chr03: 51245798-51261534 Eucalyptus grandis
Eucgr.C02572 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51245798-51255797 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041454 5273 Angiosperm View MSA
124062446 5270 Rosid View MSA
123738012 5271 Pentapetalae View MSA
122787271 5272 Eudicot View MSA
121345501 5274 Embryophyte View MSA
123423794 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 119.427 0.0 282.534 High  
cufflinks 8.80257 0.0 24.8021   Low
cufflinks 89.5946 0.0 207.659 High  
cufflinks 12.3451 0.0 28.5909    
cufflinks 15.3028 0.0 35.0253    
cufflinks 124.427 0.0 294.172 High  

0 Strain