Gene : Eucgr.C02517 E. grandis v2.0
Defline:  (1 of 2) PTHR20855:SF47 - EXPRESSED PROTEIN Genomic Order:  2006
Name:  ? Eucgr.C02517 Secondary Identifier:  ? PAC:32037545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02517 0.5kb upstream 0.5kb upstream 5637 true Chr03: 49545848-49551484 Eucalyptus grandis
Eucgr.C02517 0.5kb upstream 0.5kb upstream 500 false Chr03: 49545848-49546347 Eucalyptus grandis
Eucgr.C02517 0.5kb downstream 0.5kb downstream 5637 true Chr03: 49546348-49551984 Eucalyptus grandis
Eucgr.C02517 0.5kb downstream 0.5kb downstream 500 false Chr03: 49551485-49551984 Eucalyptus grandis
Eucgr.C02517 1.0kb upstream 1.0kb upstream 6137 true Chr03: 49545348-49551484 Eucalyptus grandis
Eucgr.C02517 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49545348-49546347 Eucalyptus grandis
Eucgr.C02517 1.0kb downstream 1.0kb downstream 6137 true Chr03: 49546348-49552484 Eucalyptus grandis
Eucgr.C02517 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49551485-49552484 Eucalyptus grandis
Eucgr.C02517 2.0kb upstream 2.0kb upstream 7137 true Chr03: 49544348-49551484 Eucalyptus grandis
Eucgr.C02517 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49544348-49546347 Eucalyptus grandis
Eucgr.C02517 2.0kb downstream 2.0kb downstream 7137 true Chr03: 49546348-49553484 Eucalyptus grandis
Eucgr.C02517 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49551485-49553484 Eucalyptus grandis
Eucgr.C02517 5.0kb upstream 5.0kb upstream 10137 true Chr03: 49541348-49551484 Eucalyptus grandis
Eucgr.C02517 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49541348-49546347 Eucalyptus grandis
Eucgr.C02517 5.0kb downstream 5.0kb downstream 10137 true Chr03: 49546348-49556484 Eucalyptus grandis
Eucgr.C02517 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49551485-49556484 Eucalyptus grandis
Eucgr.C02517 10.0kb upstream 10.0kb upstream 15137 true Chr03: 49536348-49551484 Eucalyptus grandis
Eucgr.C02517 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49536348-49546347 Eucalyptus grandis
Eucgr.C02517 10.0kb downstream 10.0kb downstream 15137 true Chr03: 49546348-49561484 Eucalyptus grandis
Eucgr.C02517 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49551485-49561484 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066963 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.5154 0.0 40.7077   High
cufflinks 4.235 0.0 11.0274    
cufflinks 18.9107 0.0 43.5144   High
cufflinks 6.28918 0.0 15.8422    
cufflinks 4.32406 0.0 11.2862    
cufflinks 6.68115 0.0 16.2049    

0 Strain