Gene : Eucgr.C02497 E. grandis v2.0
Defline:  (1 of 2) PTHR11564:SF16 - SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA Genomic Order:  2025
Name:  ? Eucgr.C02497 Secondary Identifier:  ? PAC:32038878
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02497 0.5kb upstream 0.5kb upstream 5111 true Chr03: 49975078-49980188 Eucalyptus grandis
Eucgr.C02497 0.5kb upstream 0.5kb upstream 500 false Chr03: 49975078-49975577 Eucalyptus grandis
Eucgr.C02497 0.5kb downstream 0.5kb downstream 5111 true Chr03: 49975578-49980688 Eucalyptus grandis
Eucgr.C02497 0.5kb downstream 0.5kb downstream 500 false Chr03: 49980189-49980688 Eucalyptus grandis
Eucgr.C02497 1.0kb upstream 1.0kb upstream 5611 true Chr03: 49974578-49980188 Eucalyptus grandis
Eucgr.C02497 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49974578-49975577 Eucalyptus grandis
Eucgr.C02497 1.0kb downstream 1.0kb downstream 5611 true Chr03: 49975578-49981188 Eucalyptus grandis
Eucgr.C02497 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49980189-49981188 Eucalyptus grandis
Eucgr.C02497 2.0kb upstream 2.0kb upstream 6611 true Chr03: 49973578-49980188 Eucalyptus grandis
Eucgr.C02497 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49973578-49975577 Eucalyptus grandis
Eucgr.C02497 2.0kb downstream 2.0kb downstream 6611 true Chr03: 49975578-49982188 Eucalyptus grandis
Eucgr.C02497 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49980189-49982188 Eucalyptus grandis
Eucgr.C02497 5.0kb upstream 5.0kb upstream 9611 true Chr03: 49970578-49980188 Eucalyptus grandis
Eucgr.C02497 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49970578-49975577 Eucalyptus grandis
Eucgr.C02497 5.0kb downstream 5.0kb downstream 9611 true Chr03: 49975578-49985188 Eucalyptus grandis
Eucgr.C02497 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49980189-49985188 Eucalyptus grandis
Eucgr.C02497 10.0kb upstream 10.0kb upstream 14611 true Chr03: 49965578-49980188 Eucalyptus grandis
Eucgr.C02497 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49965578-49975577 Eucalyptus grandis
Eucgr.C02497 10.0kb downstream 10.0kb downstream 14611 true Chr03: 49975578-49990188 Eucalyptus grandis
Eucgr.C02497 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49980189-49990188 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061133 5270 Rosid View MSA
123748391 5271 Pentapetalae View MSA
122789994 5272 Eudicot View MSA
122043067 5273 Angiosperm View MSA
121346015 5274 Embryophyte View MSA
123425096 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.7631 0.0 66.1619 High  
cufflinks 26.2867 0.0 58.2997    
cufflinks 27.4981 0.0 61.0632 High  
cufflinks 51.0802 0.0 116.626 High High
cufflinks 25.4757 0.0 56.4629    
cufflinks 25.6168 0.0 56.7397    

0 Strain