Gene : Eucgr.C02439 E. grandis v2.0
Defline:  (1 of 1) PTHR10906:SF9 - PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  1935
Name:  ? Eucgr.C02439 Secondary Identifier:  ? PAC:32036353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02439 0.5kb upstream 0.5kb upstream 7755 true Chr03: 47758018-47765772 Eucalyptus grandis
Eucgr.C02439 0.5kb upstream 0.5kb upstream 500 false Chr03: 47765273-47765772 Eucalyptus grandis
Eucgr.C02439 0.5kb downstream 0.5kb downstream 7755 true Chr03: 47757518-47765272 Eucalyptus grandis
Eucgr.C02439 0.5kb downstream 0.5kb downstream 500 false Chr03: 47757518-47758017 Eucalyptus grandis
Eucgr.C02439 1.0kb upstream 1.0kb upstream 8255 true Chr03: 47758018-47766272 Eucalyptus grandis
Eucgr.C02439 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47765273-47766272 Eucalyptus grandis
Eucgr.C02439 1.0kb downstream 1.0kb downstream 8255 true Chr03: 47757018-47765272 Eucalyptus grandis
Eucgr.C02439 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47757018-47758017 Eucalyptus grandis
Eucgr.C02439 2.0kb upstream 2.0kb upstream 9255 true Chr03: 47758018-47767272 Eucalyptus grandis
Eucgr.C02439 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47765273-47767272 Eucalyptus grandis
Eucgr.C02439 2.0kb downstream 2.0kb downstream 9255 true Chr03: 47756018-47765272 Eucalyptus grandis
Eucgr.C02439 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47756018-47758017 Eucalyptus grandis
Eucgr.C02439 5.0kb upstream 5.0kb upstream 12255 true Chr03: 47758018-47770272 Eucalyptus grandis
Eucgr.C02439 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47765273-47770272 Eucalyptus grandis
Eucgr.C02439 5.0kb downstream 5.0kb downstream 12255 true Chr03: 47753018-47765272 Eucalyptus grandis
Eucgr.C02439 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47753018-47758017 Eucalyptus grandis
Eucgr.C02439 10.0kb upstream 10.0kb upstream 17255 true Chr03: 47758018-47775272 Eucalyptus grandis
Eucgr.C02439 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47765273-47775272 Eucalyptus grandis
Eucgr.C02439 10.0kb downstream 10.0kb downstream 17255 true Chr03: 47748018-47765272 Eucalyptus grandis
Eucgr.C02439 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47748018-47758017 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063230 5270 Rosid View MSA
123738518 5271 Pentapetalae View MSA
122788956 5272 Eudicot View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.81962 0.0 26.5067    
cufflinks 4.96516 0.0 12.168    
cufflinks 5.2452 0.0 15.1677    
cufflinks 1.39963 0.0 4.07269   Low
cufflinks 1.97146 0.0 5.6213    
cufflinks 29.7744 0.0 86.9687   High

0 Strain