Gene : Eucgr.C02418 E. grandis v2.0
Defline:  (1 of 5) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Genomic Order:  1915
Name:  ? Eucgr.C02418 Secondary Identifier:  ? PAC:32038045
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02418 0.5kb upstream 0.5kb upstream 2102 true Chr03: 47383389-47385490 Eucalyptus grandis
Eucgr.C02418 0.5kb upstream 0.5kb upstream 500 false Chr03: 47384991-47385490 Eucalyptus grandis
Eucgr.C02418 0.5kb downstream 0.5kb downstream 2102 true Chr03: 47382889-47384990 Eucalyptus grandis
Eucgr.C02418 0.5kb downstream 0.5kb downstream 500 false Chr03: 47382889-47383388 Eucalyptus grandis
Eucgr.C02418 1.0kb upstream 1.0kb upstream 2602 true Chr03: 47383389-47385990 Eucalyptus grandis
Eucgr.C02418 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47384991-47385990 Eucalyptus grandis
Eucgr.C02418 1.0kb downstream 1.0kb downstream 2602 true Chr03: 47382389-47384990 Eucalyptus grandis
Eucgr.C02418 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47382389-47383388 Eucalyptus grandis
Eucgr.C02418 2.0kb upstream 2.0kb upstream 3602 true Chr03: 47383389-47386990 Eucalyptus grandis
Eucgr.C02418 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47384991-47386990 Eucalyptus grandis
Eucgr.C02418 2.0kb downstream 2.0kb downstream 3602 true Chr03: 47381389-47384990 Eucalyptus grandis
Eucgr.C02418 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47381389-47383388 Eucalyptus grandis
Eucgr.C02418 5.0kb upstream 5.0kb upstream 6602 true Chr03: 47383389-47389990 Eucalyptus grandis
Eucgr.C02418 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47384991-47389990 Eucalyptus grandis
Eucgr.C02418 5.0kb downstream 5.0kb downstream 6602 true Chr03: 47378389-47384990 Eucalyptus grandis
Eucgr.C02418 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47378389-47383388 Eucalyptus grandis
Eucgr.C02418 10.0kb upstream 10.0kb upstream 11602 true Chr03: 47383389-47394990 Eucalyptus grandis
Eucgr.C02418 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47384991-47394990 Eucalyptus grandis
Eucgr.C02418 10.0kb downstream 10.0kb downstream 11602 true Chr03: 47373389-47384990 Eucalyptus grandis
Eucgr.C02418 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47373389-47383388 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069023 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.7834 0.0 10.2575    
cufflinks 2.67702 0.0 7.58169    
cufflinks 1.34859 0.0 4.13095   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain