Gene : Eucgr.C02428 E. grandis v2.0
Defline:  (1 of 51) 3.6.3.8 - Calcium-transporting ATPase / Calcium-translocating P-type ATPase Genomic Order:  1925
Name:  ? Eucgr.C02428 Secondary Identifier:  ? PAC:32036180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02428 0.5kb upstream 0.5kb upstream 19371 true Chr03: 47546489-47565859 Eucalyptus grandis
Eucgr.C02428 0.5kb upstream 0.5kb upstream 500 false Chr03: 47565360-47565859 Eucalyptus grandis
Eucgr.C02428 0.5kb downstream 0.5kb downstream 19371 true Chr03: 47545989-47565359 Eucalyptus grandis
Eucgr.C02428 0.5kb downstream 0.5kb downstream 500 false Chr03: 47545989-47546488 Eucalyptus grandis
Eucgr.C02428 1.0kb upstream 1.0kb upstream 19871 true Chr03: 47546489-47566359 Eucalyptus grandis
Eucgr.C02428 1.0kb upstream 1.0kb upstream 1000 false Chr03: 47565360-47566359 Eucalyptus grandis
Eucgr.C02428 1.0kb downstream 1.0kb downstream 19871 true Chr03: 47545489-47565359 Eucalyptus grandis
Eucgr.C02428 1.0kb downstream 1.0kb downstream 1000 false Chr03: 47545489-47546488 Eucalyptus grandis
Eucgr.C02428 2.0kb upstream 2.0kb upstream 20871 true Chr03: 47546489-47567359 Eucalyptus grandis
Eucgr.C02428 2.0kb upstream 2.0kb upstream 2000 false Chr03: 47565360-47567359 Eucalyptus grandis
Eucgr.C02428 2.0kb downstream 2.0kb downstream 20871 true Chr03: 47544489-47565359 Eucalyptus grandis
Eucgr.C02428 2.0kb downstream 2.0kb downstream 2000 false Chr03: 47544489-47546488 Eucalyptus grandis
Eucgr.C02428 5.0kb upstream 5.0kb upstream 23871 true Chr03: 47546489-47570359 Eucalyptus grandis
Eucgr.C02428 5.0kb upstream 5.0kb upstream 5000 false Chr03: 47565360-47570359 Eucalyptus grandis
Eucgr.C02428 5.0kb downstream 5.0kb downstream 23871 true Chr03: 47541489-47565359 Eucalyptus grandis
Eucgr.C02428 5.0kb downstream 5.0kb downstream 5000 false Chr03: 47541489-47546488 Eucalyptus grandis
Eucgr.C02428 10.0kb upstream 10.0kb upstream 28871 true Chr03: 47546489-47575359 Eucalyptus grandis
Eucgr.C02428 10.0kb upstream 10.0kb upstream 10000 false Chr03: 47565360-47575359 Eucalyptus grandis
Eucgr.C02428 10.0kb downstream 10.0kb downstream 28871 true Chr03: 47536489-47565359 Eucalyptus grandis
Eucgr.C02428 10.0kb downstream 10.0kb downstream 10000 false Chr03: 47536489-47546488 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032330 5273 Angiosperm View MSA
124075537 5270 Rosid View MSA
123628899 5271 Pentapetalae View MSA
122663137 5272 Eudicot View MSA
121301239 5274 Embryophyte View MSA
123338909 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5198 0.0 45.6324    
cufflinks 3.79524 0.0 8.87467    
cufflinks 13.1396 0.0 29.0573    
cufflinks 4.1312 0.0 9.56025    
cufflinks 48.018 0.0 112.276 High High
cufflinks 0.196191 0.0 0.628925 Low Low

0 Strain