Gene : Eucgr.C02306 E. grandis v2.0
Defline:  (1 of 3) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  1856
Name:  ? Eucgr.C02306 Secondary Identifier:  ? PAC:32036573
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02306 0.5kb upstream 0.5kb upstream 5607 true Chr03: 45224418-45230024 Eucalyptus grandis
Eucgr.C02306 0.5kb upstream 0.5kb upstream 500 false Chr03: 45229525-45230024 Eucalyptus grandis
Eucgr.C02306 0.5kb downstream 0.5kb downstream 5607 true Chr03: 45223918-45229524 Eucalyptus grandis
Eucgr.C02306 0.5kb downstream 0.5kb downstream 500 false Chr03: 45223918-45224417 Eucalyptus grandis
Eucgr.C02306 1.0kb upstream 1.0kb upstream 6107 true Chr03: 45224418-45230524 Eucalyptus grandis
Eucgr.C02306 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45229525-45230524 Eucalyptus grandis
Eucgr.C02306 1.0kb downstream 1.0kb downstream 6107 true Chr03: 45223418-45229524 Eucalyptus grandis
Eucgr.C02306 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45223418-45224417 Eucalyptus grandis
Eucgr.C02306 2.0kb upstream 2.0kb upstream 7107 true Chr03: 45224418-45231524 Eucalyptus grandis
Eucgr.C02306 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45229525-45231524 Eucalyptus grandis
Eucgr.C02306 2.0kb downstream 2.0kb downstream 7107 true Chr03: 45222418-45229524 Eucalyptus grandis
Eucgr.C02306 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45222418-45224417 Eucalyptus grandis
Eucgr.C02306 5.0kb upstream 5.0kb upstream 10107 true Chr03: 45224418-45234524 Eucalyptus grandis
Eucgr.C02306 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45229525-45234524 Eucalyptus grandis
Eucgr.C02306 5.0kb downstream 5.0kb downstream 10107 true Chr03: 45219418-45229524 Eucalyptus grandis
Eucgr.C02306 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45219418-45224417 Eucalyptus grandis
Eucgr.C02306 10.0kb upstream 10.0kb upstream 15107 true Chr03: 45224418-45239524 Eucalyptus grandis
Eucgr.C02306 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45229525-45239524 Eucalyptus grandis
Eucgr.C02306 10.0kb downstream 10.0kb downstream 15107 true Chr03: 45214418-45229524 Eucalyptus grandis
Eucgr.C02306 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45214418-45224417 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050806 5270 Rosid View MSA
123751797 5271 Pentapetalae View MSA
122791749 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.7226 0.0 148.098 High  
cufflinks 139.426 0.0 341.483 High High
cufflinks 73.1186 0.0 204.203 High  
cufflinks 122.068 0.0 293.47 High  
cufflinks 53.3945 0.0 127.136 High Low
cufflinks 136.254 0.0 327.326 High  

0 Strain