Gene : Eucgr.C02216 E. grandis v2.0
Defline:  (1 of 1) PTHR13026 - NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52 Genomic Order:  1757
Name:  ? Eucgr.C02216 Secondary Identifier:  ? PAC:32038832
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02216 0.5kb upstream 0.5kb upstream 2707 true Chr03: 41671700-41674406 Eucalyptus grandis
Eucgr.C02216 0.5kb upstream 0.5kb upstream 500 false Chr03: 41671700-41672199 Eucalyptus grandis
Eucgr.C02216 0.5kb downstream 0.5kb downstream 2707 true Chr03: 41672200-41674906 Eucalyptus grandis
Eucgr.C02216 0.5kb downstream 0.5kb downstream 500 false Chr03: 41674407-41674906 Eucalyptus grandis
Eucgr.C02216 1.0kb upstream 1.0kb upstream 3207 true Chr03: 41671200-41674406 Eucalyptus grandis
Eucgr.C02216 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41671200-41672199 Eucalyptus grandis
Eucgr.C02216 1.0kb downstream 1.0kb downstream 3207 true Chr03: 41672200-41675406 Eucalyptus grandis
Eucgr.C02216 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41674407-41675406 Eucalyptus grandis
Eucgr.C02216 2.0kb upstream 2.0kb upstream 4207 true Chr03: 41670200-41674406 Eucalyptus grandis
Eucgr.C02216 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41670200-41672199 Eucalyptus grandis
Eucgr.C02216 2.0kb downstream 2.0kb downstream 4207 true Chr03: 41672200-41676406 Eucalyptus grandis
Eucgr.C02216 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41674407-41676406 Eucalyptus grandis
Eucgr.C02216 5.0kb upstream 5.0kb upstream 7207 true Chr03: 41667200-41674406 Eucalyptus grandis
Eucgr.C02216 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41667200-41672199 Eucalyptus grandis
Eucgr.C02216 5.0kb downstream 5.0kb downstream 7207 true Chr03: 41672200-41679406 Eucalyptus grandis
Eucgr.C02216 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41674407-41679406 Eucalyptus grandis
Eucgr.C02216 10.0kb upstream 10.0kb upstream 12207 true Chr03: 41662200-41674406 Eucalyptus grandis
Eucgr.C02216 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41662200-41672199 Eucalyptus grandis
Eucgr.C02216 10.0kb downstream 10.0kb downstream 12207 true Chr03: 41672200-41684406 Eucalyptus grandis
Eucgr.C02216 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41674407-41684406 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041241 5273 Angiosperm View MSA
124064364 5270 Rosid View MSA
123737116 5271 Pentapetalae View MSA
122788031 5272 Eudicot View MSA
121344172 5274 Embryophyte View MSA
123424078 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4802 0.0 39.4678   High
cufflinks 5.66453 0.0 13.3642   Low
cufflinks 14.9961 0.0 33.7023    
cufflinks 10.7256 0.0 24.7831    
cufflinks 9.99041 0.0 23.2773    
cufflinks 14.4214 0.0 32.6094    

0 Strain