Gene : Eucgr.C02205 E. grandis v2.0
Defline:  (1 of 1) PTHR14155:SF78 - RING-H2 FINGER PROTEIN ATL43 Genomic Order:  1748
Name:  ? Eucgr.C02205 Secondary Identifier:  ? PAC:32038938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02205 0.5kb upstream 0.5kb upstream 1658 true Chr03: 41416302-41417959 Eucalyptus grandis
Eucgr.C02205 0.5kb upstream 0.5kb upstream 500 false Chr03: 41416302-41416801 Eucalyptus grandis
Eucgr.C02205 0.5kb downstream 0.5kb downstream 1658 true Chr03: 41416802-41418459 Eucalyptus grandis
Eucgr.C02205 0.5kb downstream 0.5kb downstream 500 false Chr03: 41417960-41418459 Eucalyptus grandis
Eucgr.C02205 1.0kb upstream 1.0kb upstream 2158 true Chr03: 41415802-41417959 Eucalyptus grandis
Eucgr.C02205 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41415802-41416801 Eucalyptus grandis
Eucgr.C02205 1.0kb downstream 1.0kb downstream 2158 true Chr03: 41416802-41418959 Eucalyptus grandis
Eucgr.C02205 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41417960-41418959 Eucalyptus grandis
Eucgr.C02205 2.0kb upstream 2.0kb upstream 3158 true Chr03: 41414802-41417959 Eucalyptus grandis
Eucgr.C02205 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41414802-41416801 Eucalyptus grandis
Eucgr.C02205 2.0kb downstream 2.0kb downstream 3158 true Chr03: 41416802-41419959 Eucalyptus grandis
Eucgr.C02205 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41417960-41419959 Eucalyptus grandis
Eucgr.C02205 5.0kb upstream 5.0kb upstream 6158 true Chr03: 41411802-41417959 Eucalyptus grandis
Eucgr.C02205 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41411802-41416801 Eucalyptus grandis
Eucgr.C02205 5.0kb downstream 5.0kb downstream 6158 true Chr03: 41416802-41422959 Eucalyptus grandis
Eucgr.C02205 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41417960-41422959 Eucalyptus grandis
Eucgr.C02205 10.0kb upstream 10.0kb upstream 11158 true Chr03: 41406802-41417959 Eucalyptus grandis
Eucgr.C02205 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41406802-41416801 Eucalyptus grandis
Eucgr.C02205 10.0kb downstream 10.0kb downstream 11158 true Chr03: 41416802-41427959 Eucalyptus grandis
Eucgr.C02205 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41417960-41427959 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061458 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.37086 0.0 15.6946    
cufflinks 3.6081 0.0 9.53396    
cufflinks 7.20922 0.0 17.794   High
cufflinks 2.49297 0.0 6.8536   Low
cufflinks 3.19013 0.0 8.50338    
cufflinks 4.81422 0.0 12.0825    

0 Strain