Gene : Eucgr.C02197 E. grandis v2.0
Defline:  (1 of 1) PTHR10457:SF11 - GALACTURONOKINASE Genomic Order:  1740
Name:  ? Eucgr.C02197 Secondary Identifier:  ? PAC:32035936
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-4 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02197 0.5kb upstream 0.5kb upstream 14132 true Chr03: 41145567-41159698 Eucalyptus grandis
Eucgr.C02197 0.5kb upstream 0.5kb upstream 500 false Chr03: 41145567-41146066 Eucalyptus grandis
Eucgr.C02197 0.5kb downstream 0.5kb downstream 14132 true Chr03: 41146067-41160198 Eucalyptus grandis
Eucgr.C02197 0.5kb downstream 0.5kb downstream 500 false Chr03: 41159699-41160198 Eucalyptus grandis
Eucgr.C02197 1.0kb upstream 1.0kb upstream 14632 true Chr03: 41145067-41159698 Eucalyptus grandis
Eucgr.C02197 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41145067-41146066 Eucalyptus grandis
Eucgr.C02197 1.0kb downstream 1.0kb downstream 14632 true Chr03: 41146067-41160698 Eucalyptus grandis
Eucgr.C02197 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41159699-41160698 Eucalyptus grandis
Eucgr.C02197 2.0kb upstream 2.0kb upstream 15632 true Chr03: 41144067-41159698 Eucalyptus grandis
Eucgr.C02197 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41144067-41146066 Eucalyptus grandis
Eucgr.C02197 2.0kb downstream 2.0kb downstream 15632 true Chr03: 41146067-41161698 Eucalyptus grandis
Eucgr.C02197 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41159699-41161698 Eucalyptus grandis
Eucgr.C02197 5.0kb upstream 5.0kb upstream 18632 true Chr03: 41141067-41159698 Eucalyptus grandis
Eucgr.C02197 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41141067-41146066 Eucalyptus grandis
Eucgr.C02197 5.0kb downstream 5.0kb downstream 18632 true Chr03: 41146067-41164698 Eucalyptus grandis
Eucgr.C02197 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41159699-41164698 Eucalyptus grandis
Eucgr.C02197 10.0kb upstream 10.0kb upstream 23632 true Chr03: 41136067-41159698 Eucalyptus grandis
Eucgr.C02197 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41136067-41146066 Eucalyptus grandis
Eucgr.C02197 10.0kb downstream 10.0kb downstream 23632 true Chr03: 41146067-41169698 Eucalyptus grandis
Eucgr.C02197 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41159699-41169698 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050204 5270 Rosid View MSA
123740556 5271 Pentapetalae View MSA
122789142 5272 Eudicot View MSA
122041803 5273 Angiosperm View MSA
121344936 5274 Embryophyte View MSA
123425309 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8051 0.0 31.194    
cufflinks 48.5111 0.0 112.575 High High
cufflinks 8.72467 0.0 20.268   Low
cufflinks 65.9864 0.0 174.773 High High
cufflinks 18.5058 0.0 41.8822    
cufflinks 13.5281 0.0 32.2046    

0 Strain