Gene : Eucgr.C02158 E. grandis v2.0
Defline:  (1 of 1) PTHR33650:SF1 - CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN Genomic Order:  1705
Name:  ? Eucgr.C02158 Secondary Identifier:  ? PAC:32037206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02158 0.5kb upstream 0.5kb upstream 8929 true Chr03: 40046085-40055013 Eucalyptus grandis
Eucgr.C02158 0.5kb upstream 0.5kb upstream 500 false Chr03: 40046085-40046584 Eucalyptus grandis
Eucgr.C02158 0.5kb downstream 0.5kb downstream 8929 true Chr03: 40046585-40055513 Eucalyptus grandis
Eucgr.C02158 0.5kb downstream 0.5kb downstream 500 false Chr03: 40055014-40055513 Eucalyptus grandis
Eucgr.C02158 1.0kb upstream 1.0kb upstream 9429 true Chr03: 40045585-40055013 Eucalyptus grandis
Eucgr.C02158 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40045585-40046584 Eucalyptus grandis
Eucgr.C02158 1.0kb downstream 1.0kb downstream 9429 true Chr03: 40046585-40056013 Eucalyptus grandis
Eucgr.C02158 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40055014-40056013 Eucalyptus grandis
Eucgr.C02158 2.0kb upstream 2.0kb upstream 10429 true Chr03: 40044585-40055013 Eucalyptus grandis
Eucgr.C02158 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40044585-40046584 Eucalyptus grandis
Eucgr.C02158 2.0kb downstream 2.0kb downstream 10429 true Chr03: 40046585-40057013 Eucalyptus grandis
Eucgr.C02158 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40055014-40057013 Eucalyptus grandis
Eucgr.C02158 5.0kb upstream 5.0kb upstream 13429 true Chr03: 40041585-40055013 Eucalyptus grandis
Eucgr.C02158 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40041585-40046584 Eucalyptus grandis
Eucgr.C02158 5.0kb downstream 5.0kb downstream 13429 true Chr03: 40046585-40060013 Eucalyptus grandis
Eucgr.C02158 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40055014-40060013 Eucalyptus grandis
Eucgr.C02158 10.0kb upstream 10.0kb upstream 18429 true Chr03: 40036585-40055013 Eucalyptus grandis
Eucgr.C02158 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40036585-40046584 Eucalyptus grandis
Eucgr.C02158 10.0kb downstream 10.0kb downstream 18429 true Chr03: 40046585-40065013 Eucalyptus grandis
Eucgr.C02158 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40055014-40065013 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066882 5270 Rosid View MSA
123744226 5271 Pentapetalae View MSA
122786508 5272 Eudicot View MSA
122044615 5273 Angiosperm View MSA
121350431 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.08492 0.0 18.8876    
cufflinks 5.72109 0.0 19.2137    
cufflinks 7.56029 0.0 21.5058    
cufflinks 4.97271 0.0 11.9039   Low
cufflinks 6.3294 0.0 14.9221    
cufflinks 10.4644 0.0 31.1157   High

0 Strain