Gene : Eucgr.C02159 E. grandis v2.0
Defline:  (1 of 1) PTHR12526//PTHR12526:SF392 - GLYCOSYLTRANSFERASE Genomic Order:  1706
Name:  ? Eucgr.C02159 Secondary Identifier:  ? PAC:32036014
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCOGENSYNTH-PWY Eucalyptus grandis pathologic  
Egrandis PWY-622 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C02159 0.5kb upstream 0.5kb upstream 19550 true Chr03: 40068635-40088184 Eucalyptus grandis
Eucgr.C02159 0.5kb upstream 0.5kb upstream 500 false Chr03: 40087685-40088184 Eucalyptus grandis
Eucgr.C02159 0.5kb downstream 0.5kb downstream 19550 true Chr03: 40068135-40087684 Eucalyptus grandis
Eucgr.C02159 0.5kb downstream 0.5kb downstream 500 false Chr03: 40068135-40068634 Eucalyptus grandis
Eucgr.C02159 1.0kb upstream 1.0kb upstream 20050 true Chr03: 40068635-40088684 Eucalyptus grandis
Eucgr.C02159 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40087685-40088684 Eucalyptus grandis
Eucgr.C02159 1.0kb downstream 1.0kb downstream 20050 true Chr03: 40067635-40087684 Eucalyptus grandis
Eucgr.C02159 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40067635-40068634 Eucalyptus grandis
Eucgr.C02159 2.0kb upstream 2.0kb upstream 21050 true Chr03: 40068635-40089684 Eucalyptus grandis
Eucgr.C02159 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40087685-40089684 Eucalyptus grandis
Eucgr.C02159 2.0kb downstream 2.0kb downstream 21050 true Chr03: 40066635-40087684 Eucalyptus grandis
Eucgr.C02159 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40066635-40068634 Eucalyptus grandis
Eucgr.C02159 5.0kb upstream 5.0kb upstream 24050 true Chr03: 40068635-40092684 Eucalyptus grandis
Eucgr.C02159 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40087685-40092684 Eucalyptus grandis
Eucgr.C02159 5.0kb downstream 5.0kb downstream 24050 true Chr03: 40063635-40087684 Eucalyptus grandis
Eucgr.C02159 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40063635-40068634 Eucalyptus grandis
Eucgr.C02159 10.0kb upstream 10.0kb upstream 29050 true Chr03: 40068635-40097684 Eucalyptus grandis
Eucgr.C02159 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40087685-40097684 Eucalyptus grandis
Eucgr.C02159 10.0kb downstream 10.0kb downstream 29050 true Chr03: 40058635-40087684 Eucalyptus grandis
Eucgr.C02159 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40058635-40068634 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071806 5270 Rosid View MSA
123751940 5271 Pentapetalae View MSA
122774263 5272 Eudicot View MSA
122049203 5273 Angiosperm View MSA
121349172 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.84308 0.0 9.58344    
cufflinks 8.57473 0.0 19.6657    
cufflinks 4.61393 0.0 11.1567    
cufflinks 8.21678 0.0 19.7742    
cufflinks 10.3657 0.0 29.0567   High
cufflinks 3.35012 0.0 8.77043   Low

0 Strain