Gene : Eucgr.C03149 E. grandis v2.0
Defline:  (1 of 1) PTHR23350 - PEROXISOME ASSEMBLY PROTEIN 10 Genomic Order:  2553
Name:  ? Eucgr.C03149 Secondary Identifier:  ? PAC:32036090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03149 0.5kb upstream 0.5kb upstream 4312 true Chr03: 63721517-63725828 Eucalyptus grandis
Eucgr.C03149 0.5kb upstream 0.5kb upstream 500 false Chr03: 63725329-63725828 Eucalyptus grandis
Eucgr.C03149 0.5kb downstream 0.5kb downstream 4312 true Chr03: 63721017-63725328 Eucalyptus grandis
Eucgr.C03149 0.5kb downstream 0.5kb downstream 500 false Chr03: 63721017-63721516 Eucalyptus grandis
Eucgr.C03149 1.0kb upstream 1.0kb upstream 4812 true Chr03: 63721517-63726328 Eucalyptus grandis
Eucgr.C03149 1.0kb upstream 1.0kb upstream 1000 false Chr03: 63725329-63726328 Eucalyptus grandis
Eucgr.C03149 1.0kb downstream 1.0kb downstream 4812 true Chr03: 63720517-63725328 Eucalyptus grandis
Eucgr.C03149 1.0kb downstream 1.0kb downstream 1000 false Chr03: 63720517-63721516 Eucalyptus grandis
Eucgr.C03149 2.0kb upstream 2.0kb upstream 5812 true Chr03: 63721517-63727328 Eucalyptus grandis
Eucgr.C03149 2.0kb upstream 2.0kb upstream 2000 false Chr03: 63725329-63727328 Eucalyptus grandis
Eucgr.C03149 2.0kb downstream 2.0kb downstream 5812 true Chr03: 63719517-63725328 Eucalyptus grandis
Eucgr.C03149 2.0kb downstream 2.0kb downstream 2000 false Chr03: 63719517-63721516 Eucalyptus grandis
Eucgr.C03149 5.0kb upstream 5.0kb upstream 8812 true Chr03: 63721517-63730328 Eucalyptus grandis
Eucgr.C03149 5.0kb upstream 5.0kb upstream 5000 false Chr03: 63725329-63730328 Eucalyptus grandis
Eucgr.C03149 5.0kb downstream 5.0kb downstream 8812 true Chr03: 63716517-63725328 Eucalyptus grandis
Eucgr.C03149 5.0kb downstream 5.0kb downstream 5000 false Chr03: 63716517-63721516 Eucalyptus grandis
Eucgr.C03149 10.0kb upstream 10.0kb upstream 13812 true Chr03: 63721517-63735328 Eucalyptus grandis
Eucgr.C03149 10.0kb upstream 10.0kb upstream 10000 false Chr03: 63725329-63735328 Eucalyptus grandis
Eucgr.C03149 10.0kb downstream 10.0kb downstream 13812 true Chr03: 63711517-63725328 Eucalyptus grandis
Eucgr.C03149 10.0kb downstream 10.0kb downstream 10000 false Chr03: 63711517-63721516 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065746 5270 Rosid View MSA
123740954 5271 Pentapetalae View MSA
122791656 5272 Eudicot View MSA
122041826 5273 Angiosperm View MSA
121346227 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6423 0.0 29.0521    
cufflinks 14.3634 0.0 32.6303   High
cufflinks 12.5339 0.0 28.8166   Low
cufflinks 13.5659 0.0 30.9508    
cufflinks 13.8877 0.0 31.7004    
cufflinks 13.0928 0.0 30.0015    

0 Strain