Gene : Eucgr.C03170 E. grandis v2.0
Defline:  (1 of 2) PTHR10992:SF731 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  2570
Name:  ? Eucgr.C03170 Secondary Identifier:  ? PAC:32036233
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03170 0.5kb upstream 0.5kb upstream 3387 true Chr03: 64056355-64059741 Eucalyptus grandis
Eucgr.C03170 0.5kb upstream 0.5kb upstream 500 false Chr03: 64059242-64059741 Eucalyptus grandis
Eucgr.C03170 0.5kb downstream 0.5kb downstream 3387 true Chr03: 64055855-64059241 Eucalyptus grandis
Eucgr.C03170 0.5kb downstream 0.5kb downstream 500 false Chr03: 64055855-64056354 Eucalyptus grandis
Eucgr.C03170 1.0kb upstream 1.0kb upstream 3887 true Chr03: 64056355-64060241 Eucalyptus grandis
Eucgr.C03170 1.0kb upstream 1.0kb upstream 1000 false Chr03: 64059242-64060241 Eucalyptus grandis
Eucgr.C03170 1.0kb downstream 1.0kb downstream 3887 true Chr03: 64055355-64059241 Eucalyptus grandis
Eucgr.C03170 1.0kb downstream 1.0kb downstream 1000 false Chr03: 64055355-64056354 Eucalyptus grandis
Eucgr.C03170 2.0kb upstream 2.0kb upstream 4887 true Chr03: 64056355-64061241 Eucalyptus grandis
Eucgr.C03170 2.0kb upstream 2.0kb upstream 2000 false Chr03: 64059242-64061241 Eucalyptus grandis
Eucgr.C03170 2.0kb downstream 2.0kb downstream 4887 true Chr03: 64054355-64059241 Eucalyptus grandis
Eucgr.C03170 2.0kb downstream 2.0kb downstream 2000 false Chr03: 64054355-64056354 Eucalyptus grandis
Eucgr.C03170 5.0kb upstream 5.0kb upstream 7887 true Chr03: 64056355-64064241 Eucalyptus grandis
Eucgr.C03170 5.0kb upstream 5.0kb upstream 5000 false Chr03: 64059242-64064241 Eucalyptus grandis
Eucgr.C03170 5.0kb downstream 5.0kb downstream 7887 true Chr03: 64051355-64059241 Eucalyptus grandis
Eucgr.C03170 5.0kb downstream 5.0kb downstream 5000 false Chr03: 64051355-64056354 Eucalyptus grandis
Eucgr.C03170 10.0kb upstream 10.0kb upstream 12887 true Chr03: 64056355-64069241 Eucalyptus grandis
Eucgr.C03170 10.0kb upstream 10.0kb upstream 10000 false Chr03: 64059242-64069241 Eucalyptus grandis
Eucgr.C03170 10.0kb downstream 10.0kb downstream 12887 true Chr03: 64046355-64059241 Eucalyptus grandis
Eucgr.C03170 10.0kb downstream 10.0kb downstream 10000 false Chr03: 64046355-64056354 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060588 5270 Rosid View MSA
123737502 5271 Pentapetalae View MSA
122795240 5272 Eudicot View MSA
122044189 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26899 0.0 8.65409    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.03765 0.0 12.8164    
cufflinks 5.65707 0.0 14.2282    
cufflinks 18.2045 0.0 41.3132   High
cufflinks 2.70143 0.0 7.26028    

0 Strain