Gene : Eucgr.C03047 E. grandis v2.0
Defline:  (1 of 2) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  2481
Name:  ? Eucgr.C03047 Secondary Identifier:  ? PAC:32039469
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLYCLEAV-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03047 0.5kb upstream 0.5kb upstream 7366 true Chr03: 61292088-61299453 Eucalyptus grandis
Eucgr.C03047 0.5kb upstream 0.5kb upstream 500 false Chr03: 61298954-61299453 Eucalyptus grandis
Eucgr.C03047 0.5kb downstream 0.5kb downstream 7366 true Chr03: 61291588-61298953 Eucalyptus grandis
Eucgr.C03047 0.5kb downstream 0.5kb downstream 500 false Chr03: 61291588-61292087 Eucalyptus grandis
Eucgr.C03047 1.0kb upstream 1.0kb upstream 7866 true Chr03: 61292088-61299953 Eucalyptus grandis
Eucgr.C03047 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61298954-61299953 Eucalyptus grandis
Eucgr.C03047 1.0kb downstream 1.0kb downstream 7866 true Chr03: 61291088-61298953 Eucalyptus grandis
Eucgr.C03047 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61291088-61292087 Eucalyptus grandis
Eucgr.C03047 2.0kb upstream 2.0kb upstream 8866 true Chr03: 61292088-61300953 Eucalyptus grandis
Eucgr.C03047 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61298954-61300953 Eucalyptus grandis
Eucgr.C03047 2.0kb downstream 2.0kb downstream 8866 true Chr03: 61290088-61298953 Eucalyptus grandis
Eucgr.C03047 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61290088-61292087 Eucalyptus grandis
Eucgr.C03047 5.0kb upstream 5.0kb upstream 11866 true Chr03: 61292088-61303953 Eucalyptus grandis
Eucgr.C03047 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61298954-61303953 Eucalyptus grandis
Eucgr.C03047 5.0kb downstream 5.0kb downstream 11866 true Chr03: 61287088-61298953 Eucalyptus grandis
Eucgr.C03047 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61287088-61292087 Eucalyptus grandis
Eucgr.C03047 10.0kb upstream 10.0kb upstream 16866 true Chr03: 61292088-61308953 Eucalyptus grandis
Eucgr.C03047 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61298954-61308953 Eucalyptus grandis
Eucgr.C03047 10.0kb downstream 10.0kb downstream 16866 true Chr03: 61282088-61298953 Eucalyptus grandis
Eucgr.C03047 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61282088-61292087 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.8022 0.0 66.3801    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.0397 0.0 31.5832    
cufflinks 0.0958923 0.0 0.364662 Low Low
cufflinks 0.549778 0.0 1.68145 Low  
cufflinks 218.534 0.0 852.942 High High

0 Strain