Gene : Eucgr.C03048 E. grandis v2.0
Defline:  (1 of 3) PTHR10071//PTHR10071:SF191 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR Genomic Order:  2482
Name:  ? Eucgr.C03048 Secondary Identifier:  ? PAC:32038203
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C03048 0.5kb upstream 0.5kb upstream 3411 true Chr03: 61308671-61312081 Eucalyptus grandis
Eucgr.C03048 0.5kb upstream 0.5kb upstream 500 false Chr03: 61311582-61312081 Eucalyptus grandis
Eucgr.C03048 0.5kb downstream 0.5kb downstream 3411 true Chr03: 61308171-61311581 Eucalyptus grandis
Eucgr.C03048 0.5kb downstream 0.5kb downstream 500 false Chr03: 61308171-61308670 Eucalyptus grandis
Eucgr.C03048 1.0kb upstream 1.0kb upstream 3911 true Chr03: 61308671-61312581 Eucalyptus grandis
Eucgr.C03048 1.0kb upstream 1.0kb upstream 1000 false Chr03: 61311582-61312581 Eucalyptus grandis
Eucgr.C03048 1.0kb downstream 1.0kb downstream 3911 true Chr03: 61307671-61311581 Eucalyptus grandis
Eucgr.C03048 1.0kb downstream 1.0kb downstream 1000 false Chr03: 61307671-61308670 Eucalyptus grandis
Eucgr.C03048 2.0kb upstream 2.0kb upstream 4911 true Chr03: 61308671-61313581 Eucalyptus grandis
Eucgr.C03048 2.0kb upstream 2.0kb upstream 2000 false Chr03: 61311582-61313581 Eucalyptus grandis
Eucgr.C03048 2.0kb downstream 2.0kb downstream 4911 true Chr03: 61306671-61311581 Eucalyptus grandis
Eucgr.C03048 2.0kb downstream 2.0kb downstream 2000 false Chr03: 61306671-61308670 Eucalyptus grandis
Eucgr.C03048 5.0kb upstream 5.0kb upstream 7911 true Chr03: 61308671-61316581 Eucalyptus grandis
Eucgr.C03048 5.0kb upstream 5.0kb upstream 5000 false Chr03: 61311582-61316581 Eucalyptus grandis
Eucgr.C03048 5.0kb downstream 5.0kb downstream 7911 true Chr03: 61303671-61311581 Eucalyptus grandis
Eucgr.C03048 5.0kb downstream 5.0kb downstream 5000 false Chr03: 61303671-61308670 Eucalyptus grandis
Eucgr.C03048 10.0kb upstream 10.0kb upstream 12911 true Chr03: 61308671-61321581 Eucalyptus grandis
Eucgr.C03048 10.0kb upstream 10.0kb upstream 10000 false Chr03: 61311582-61321581 Eucalyptus grandis
Eucgr.C03048 10.0kb downstream 10.0kb downstream 12911 true Chr03: 61298671-61311581 Eucalyptus grandis
Eucgr.C03048 10.0kb downstream 10.0kb downstream 10000 false Chr03: 61298671-61308670 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071935 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.246068 0.0 0.838345 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.213008 0.0 0.731415 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.83693 0.0 2.47445 Low High

0 Strain